RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GRIK5Q16478 980 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 DZIP1LQ8IYY4 767 aaKnown RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 VGLL2Q8N8G2 317 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 TMC2Q8TDI7 906 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 API5Q9BZZ5 524 aaKnown RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 SIL1Q9H173 461 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 ZNF70Q9UC06 446 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-211ENST00000547950 SERPINA10Q9UK55 444 aa8.38□□□□□ -1.07
SCAF11-211ENST00000547950 TCP10L2B9ZVM9 353 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 EYA2O00167 538 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 PPP1R12BO60237 982 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-211ENST00000547950 CRKP46108 304 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 TM4SF4P48230 202 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 RFX5P48382 616 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-211ENST00000547950 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
SCAF11-211ENST00000547950 PUM3Q15397 648 aaKnown RBP8.37□□□□□ -1.07
SCAF11-211ENST00000547950 LDLRAD1Q5T700 205 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
SCAF11-211ENST00000547950 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
SCAF11-211ENST00000547950 SLC5A1P13866 664 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 FGFR2P21802 821 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 ATG9AQ7Z3C6 839 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 TBC1D22AQ8WUA7 517 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 LPIN2Q92539 896 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
SCAF11-211ENST00000547950 CEP126Q9P2H0 1117 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 PPP2R3BQ9Y5P8 575 aa8.36□□□□□ -1.07
SCAF11-211ENST00000547950 LRRFIP2Q9Y608 721 aaKnown RBP8.36□□□□□ -1.07
SCAF11-211ENST00000547950 TRPM7Q96QT4 1865 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
SCAF11-211ENST00000547950 IREB2P48200 963 aaKnown RBP8.35□□□□□ -1.07
SCAF11-211ENST00000547950 TNNI2P48788 182 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 CACNB3P54284 484 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 SREBF2Q12772 1141 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 TNFAIP1Q13829 316 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 ZNF687Q8N1G0 1237 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 TEKT1Q969V4 418 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 MEIS3Q99687 375 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 TMEM39BQ9GZU3 492 aa8.35□□□□□ -1.07
SCAF11-211ENST00000547950 PA2G4Q9UQ80 394 aaKnown RBP8.35□□□□□ -1.07
SCAF11-211ENST00000547950 MANSC4A6NHS7 340 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 BCAR3O75815 825 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 CIAO1O76071 339 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 HDLBPQ00341 1268 aaKnown RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 MAP3K11Q16584 847 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 ATP2B3Q16720 1220 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 INTS3Q68E01 1043 aaKnown RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 CTU1Q7Z7A3 348 aaKnown RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 ANKRD13AQ8IZ07 590 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 ARHGAP45Q92619 1136 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 CLUAP1Q96AJ1 413 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 TEPSINQ96N21 525 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 R3HDMLQ9H3Y0 253 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 ELP3Q9H9T3 547 aa8.34□□□□□ -1.07
SCAF11-211ENST00000547950 GNL3LQ9NVN8 582 aaKnown RBP8.34□□□□□ -1.07
SCAF11-211ENST00000547950 THSD7BQ9C0I4 1608 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 GPR25O00155 361 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 SRGAP3O43295 1099 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 GNAI3P08754 354 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 NUDT7P0C024 238 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 IL15P40933 162 aaPredicted RBP8.33□□□□□ -1.08
SCAF11-211ENST00000547950 INHBEP58166 350 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 TIMM10P62072 90 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCAF11-211ENST00000547950 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
SCAF11-211ENST00000547950 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
SCAF11-211ENST00000547950 WDR66Q8TBY9 1149 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 TMOD2Q9NZR1 351 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 TNNQ9UQP3 1299 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 SPEF2Q9C093 1822 aa8.33□□□□□ -1.08
SCAF11-211ENST00000547950 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 FKTNO75072 461 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 ZBTB48P10074 688 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-211ENST00000547950 ADORA1P30542 326 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 GJA5P36382 358 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 PHKA1P46020 1223 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 MAP3K9P80192 1104 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 MLLT1Q03111 559 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-211ENST00000547950 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 ATF7IPQ6VMQ6 1270 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 OPTNQ96CV9 577 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 COPRSQ9NQ92 184 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 MYH3P11055 1940 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 PAPPA2Q9BXP8 1791 aa8.32□□□□□ -1.08
SCAF11-211ENST00000547950 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
SCAF11-211ENST00000547950 MAST3O60307 1309 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 IGF2BP3O00425 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
SCAF11-211ENST00000547950 GNAI2P04899 355 aa8.31□□□□□ -1.08
SCAF11-211ENST00000547950 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms