RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 HOOK2Q96ED9 719 aa25.36■■□□□ 1.65
SSH1-207ENST00000547862 MEIS3Q99687 375 aa25.36■■□□□ 1.65
SSH1-207ENST00000547862 POTEFA5A3E0 1075 aa25.35■■□□□ 1.65
SSH1-207ENST00000547862 CIAO1O76071 339 aa25.35■■□□□ 1.65
SSH1-207ENST00000547862 ECM2O94769 699 aaPredicted RBP25.35■■□□□ 1.65
SSH1-207ENST00000547862 ERO1BQ86YB8 467 aa25.35■■□□□ 1.65
SSH1-207ENST00000547862 TRMT2AQ8IZ69 625 aaKnown RBP25.35■■□□□ 1.65
SSH1-207ENST00000547862 GNL3LQ9NVN8 582 aaKnown RBP25.35■■□□□ 1.65
SSH1-207ENST00000547862 CENPFP49454 3210 aa25.35■■□□□ 1.65
SSH1-207ENST00000547862 LDHBP07195 334 aaKnown RBP25.34■■□□□ 1.65
SSH1-207ENST00000547862 ADORA1P30542 326 aa25.34■■□□□ 1.65
SSH1-207ENST00000547862 FKBP1CQ5VVH2 108 aa25.34■■□□□ 1.65
SSH1-207ENST00000547862 MRIQ9BWK5 157 aa25.34■■□□□ 1.65
SSH1-207ENST00000547862 ZNF341Q9BYN7 854 aa25.34■■□□□ 1.65
SSH1-207ENST00000547862 CETPP11597 493 aa25.33■■□□□ 1.65
SSH1-207ENST00000547862 INPP5BP32019 993 aa25.33■■□□□ 1.65
SSH1-207ENST00000547862 NFIAQ12857 509 aa25.33■■□□□ 1.65
SSH1-207ENST00000547862 CDC42EP5Q6NZY7 148 aa25.33■■□□□ 1.65
SSH1-207ENST00000547862 IRF6O14896 467 aa25.32■■□□□ 1.64
SSH1-207ENST00000547862 CT47B1P0C2W7 299 aaPredicted RBP25.32■■□□□ 1.64
SSH1-207ENST00000547862 SNAPC2Q13487 334 aa25.32■■□□□ 1.64
SSH1-207ENST00000547862 BTBD19C9JJ37 291 aa25.31■■□□□ 1.64
SSH1-207ENST00000547862 IL15P40933 162 aaPredicted RBP25.31■■□□□ 1.64
SSH1-207ENST00000547862 PPIL2Q13356 520 aa25.31■■□□□ 1.64
SSH1-207ENST00000547862 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.31■■□□□ 1.64
SSH1-207ENST00000547862 FAM151AQ8WW52 585 aa25.31■■□□□ 1.64
SSH1-207ENST00000547862 FBXO3Q9UK99 471 aa25.31■■□□□ 1.64
SSH1-207ENST00000547862 DENND2AQ9ULE3 1009 aa25.31■■□□□ 1.64
SSH1-207ENST00000547862 WDHD1O75717 1129 aaPredicted RBP25.3■■□□□ 1.64
SSH1-207ENST00000547862 USP40Q9NVE5 1235 aa25.3■■□□□ 1.64
SSH1-207ENST00000547862 PTCH2Q9Y6C5 1203 aa25.3■■□□□ 1.64
SSH1-207ENST00000547862 KIAA0100Q14667 2235 aaKnown RBP25.29■■□□□ 1.64
SSH1-207ENST00000547862 MYCP01106 439 aaPredicted RBP25.29■■□□□ 1.64
SSH1-207ENST00000547862 RARSP54136 660 aaKnown RBP25.29■■□□□ 1.64
SSH1-207ENST00000547862 INTS3Q68E01 1043 aaKnown RBP25.29■■□□□ 1.64
SSH1-207ENST00000547862 HDAC5Q9UQL6 1122 aa25.29■■□□□ 1.64
SSH1-207ENST00000547862 CCDC102BQ68D86 513 aa25.28■■□□□ 1.64
SSH1-207ENST00000547862 DZIP1Q86YF9 867 aaKnown RBP25.28■■□□□ 1.64
SSH1-207ENST00000547862 ARHGAP39Q9C0H5 1083 aa25.28■■□□□ 1.64
SSH1-207ENST00000547862 FAM198AQ9UFP1 575 aa25.28■■□□□ 1.64
SSH1-207ENST00000547862 DOCK1Q14185 1865 aa25.28■■□□□ 1.64
SSH1-207ENST00000547862 SLC9C1Q4G0N8 1177 aa25.27■■□□□ 1.64
SSH1-207ENST00000547862 ARMC5Q96C12 935 aa25.27■■□□□ 1.64
SSH1-207ENST00000547862 COPRSQ9NQ92 184 aa25.27■■□□□ 1.64
SSH1-207ENST00000547862 ABCF2Q9UG63 623 aa25.27■■□□□ 1.64
SSH1-207ENST00000547862 SALL1Q9NSC2 1324 aa25.27■■□□□ 1.64
SSH1-207ENST00000547862 SEMA3EO15041 775 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 SRGAP3O43295 1099 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 PPATQ06203 517 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 RASGRF1Q13972 1273 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 KIF22Q14807 665 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 ARHGEF6Q15052 776 aa25.26■■□□□ 1.63
SSH1-207ENST00000547862 TLR2O60603 784 aa25.25■■□□□ 1.63
SSH1-207ENST00000547862 TIMM10P62072 90 aa25.25■■□□□ 1.63
SSH1-207ENST00000547862 ZFPM1Q8IX07 1006 aa25.25■■□□□ 1.63
SSH1-207ENST00000547862 TNNQ9UQP3 1299 aa25.25■■□□□ 1.63
SSH1-207ENST00000547862 PTPRFP10586 1907 aa25.24■■□□□ 1.63
SSH1-207ENST00000547862 A0A1B0GUL7 405 aa25.24■■□□□ 1.63
SSH1-207ENST00000547862 EN2P19622 333 aaPredicted RBP25.24■■□□□ 1.63
SSH1-207ENST00000547862 RGS3P49796 1198 aa25.24■■□□□ 1.63
SSH1-207ENST00000547862 TFCP2Q12800 502 aa25.24■■□□□ 1.63
SSH1-207ENST00000547862 ZSCAN29Q8IWY8 852 aaPredicted RBP25.24■■□□□ 1.63
SSH1-207ENST00000547862 ZGPATQ8N5A5 531 aaKnown RBP25.24■■□□□ 1.63
SSH1-207ENST00000547862 CPA4Q9UI42 421 aa25.24■■□□□ 1.63
SSH1-207ENST00000547862 GNAI3P08754 354 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 LACTBP83111 547 aaPredicted RBP25.23■■□□□ 1.63
SSH1-207ENST00000547862 PICALMQ13492 652 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 FRAT1Q92837 279 aaPredicted RBP25.23■■□□□ 1.63
SSH1-207ENST00000547862 ZNF333Q96JL9 665 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 TMEM106CQ9BVX2 250 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 ZCCHC17Q9NP64 241 aaKnown RBP25.23■■□□□ 1.63
SSH1-207ENST00000547862 BRCA2P51587 3418 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 MGAMO43451 1857 aa25.23■■□□□ 1.63
SSH1-207ENST00000547862 MKI67P46013 3256 aaKnown RBP25.23■■□□□ 1.63
SSH1-207ENST00000547862 CCER2I3L3R5 266 aa25.22■■□□□ 1.63
SSH1-207ENST00000547862 SH3TC2Q8TF17 1288 aa25.22■■□□□ 1.63
SSH1-207ENST00000547862 XAGE2Q96GT9 111 aa25.22■■□□□ 1.63
SSH1-207ENST00000547862 NEUROD6Q96NK8 337 aa25.22■■□□□ 1.63
SSH1-207ENST00000547862 ZNF112Q9UJU3 913 aa25.22■■□□□ 1.63
SSH1-207ENST00000547862 ATAD5Q96QE3 1844 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 RFX7Q2KHR2 1363 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 GAKO14976 1311 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 PDHXO00330 501 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 BTDP43251 543 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 SLC4A8Q2Y0W8 1093 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 CLUAP1Q96AJ1 413 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 PHIPQ8WWQ0 1821 aa25.21■■□□□ 1.63
SSH1-207ENST00000547862 SLURP2P0DP57 97 aa25.2■■□□□ 1.62
SSH1-207ENST00000547862 MVPQ14764 893 aaKnown RBP25.2■■□□□ 1.62
SSH1-207ENST00000547862 NOL9Q5SY16 702 aaKnown RBP25.2■■□□□ 1.62
SSH1-207ENST00000547862 ANKRD23Q86SG2 305 aa25.2■■□□□ 1.62
SSH1-207ENST00000547862 NBPF11Q86T75 865 aa25.2■■□□□ 1.62
SSH1-207ENST00000547862 AKAP2Q9Y2D5 859 aa25.2■■□□□ 1.62
SSH1-207ENST00000547862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.2■■□□□ 1.62
SSH1-207ENST00000547862 ATRNL1Q5VV63 1379 aa25.19■■□□□ 1.62
SSH1-207ENST00000547862 MAST2Q6P0Q8 1798 aa25.19■■□□□ 1.62
SSH1-207ENST00000547862 TRIM27P14373 513 aa25.19■■□□□ 1.62
SSH1-207ENST00000547862 KCNH4Q9UQ05 1017 aa25.19■■□□□ 1.62
SSH1-207ENST00000547862 MROH7-TTC4A0A0A0MT08 1334 aa25.18■■□□□ 1.62
SSH1-207ENST00000547862 BCAR3O75815 825 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms