RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 HTATIP2Q9BUP3 242 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 VEZTQ9HBM0 779 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
CDK4-205ENST00000547853 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.51
CDK4-205ENST00000547853 TLR2O60603 784 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 GNRH1P01148 92 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 GTF2A2P52657 109 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 PRMT2P55345 433 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 RASA3Q14644 834 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 CLEC17AQ6ZS10 378 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 TTLL11Q8NHH1 800 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
CDK4-205ENST00000547853 TEPSINQ96N21 525 aa11.89□□□□□ -0.51
CDK4-205ENST00000547853 PHAXQ9H814 394 aaKnown RBP11.89□□□□□ -0.51
CDK4-205ENST00000547853 DDX60LQ5H9U9 1706 aaKnown RBP11.89□□□□□ -0.51
CDK4-205ENST00000547853 ADGRA2Q96PE1 1338 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 MYO1BO43795 1136 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 FARP2O94887 1054 aaPredicted RBP11.88□□□□□ -0.51
CDK4-205ENST00000547853 GJB1P08034 283 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 CLCN1P35523 988 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 RAB3GAP1Q15042 981 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 MRPL50Q8N5N7 158 aaKnown RBP11.88□□□□□ -0.51
CDK4-205ENST00000547853 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDK4-205ENST00000547853 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
CDK4-205ENST00000547853 ZCCHC17Q9NP64 241 aaKnown RBP11.88□□□□□ -0.51
CDK4-205ENST00000547853 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 CDC45O75419 566 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDK4-205ENST00000547853 CCL5P13501 91 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
CDK4-205ENST00000547853 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
CDK4-205ENST00000547853 DOCK3Q8IZD9 2030 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
CDK4-205ENST00000547853 K7ELQ4 463 aaPredicted RBP11.86□□□□□ -0.51
CDK4-205ENST00000547853 VAMP4O75379 141 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 KIF22Q14807 665 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
CDK4-205ENST00000547853 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 MYH13Q9UKX3 1938 aa11.86□□□□□ -0.51
CDK4-205ENST00000547853 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 OSBPP22059 807 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 GRK4P32298 578 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
CDK4-205ENST00000547853 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 RABEP1Q15276 862 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 Q7L0L9 218 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 GRPEL1Q9HAV7 217 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 DOCK2Q92608 1830 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 MUC3AQ02505 3323 aa11.85□□□□□ -0.51
CDK4-205ENST00000547853 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 IL1R1P14778 569 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 C17orf99Q6UX52 265 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 C15orf52Q6ZUT6 534 aaKnown RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
CDK4-205ENST00000547853 STAP2Q9UGK3 403 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 CSADQ9Y600 493 aa11.84□□□□□ -0.51
CDK4-205ENST00000547853 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
CDK4-205ENST00000547853 SNAP23O00161 211 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 CETPP11597 493 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 PSMC4P43686 418 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 NUCB2P80303 420 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 CHRNDQ07001 517 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 ANKRD45Q5TZF3 282 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
CDK4-205ENST00000547853 ANP32BQ92688 251 aaKnown RBP11.83□□□□□ -0.52
CDK4-205ENST00000547853 GDF15Q99988 308 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 TMEM39BQ9GZU3 492 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 RNF208Q9H0X6 261 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 UNC93B1Q9H1C4 597 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 CWC22Q9HCG8 908 aaKnown RBP11.83□□□□□ -0.52
CDK4-205ENST00000547853 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
CDK4-205ENST00000547853 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
CDK4-205ENST00000547853 AK9Q5TCS8 1911 aa11.82□□□□□ -0.52
CDK4-205ENST00000547853 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
CDK4-205ENST00000547853 IRF6O14896 467 aa11.82□□□□□ -0.52
CDK4-205ENST00000547853 EVI5O60447 810 aa11.82□□□□□ -0.52
CDK4-205ENST00000547853 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms