RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 ATP6V1AP38606 617 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 CACTIN-AS1Q8N1I8 211 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TCP11L2Q8N4U5 519 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 BTBD6Q96KE9 485 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 MYRFLQ96LU7 910 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 ZNF777Q9ULD5 760 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 MDN1Q9NU22 5596 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TAF1P21675 1872 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 LRRC10BA6NIK2 292 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 SPDYE16A6NNV3 312 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 ZBTB7BO15156 539 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 GRNP28799 593 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 PCSK7Q16549 785 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TXNRD1Q16881 649 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 KANK4Q5T7N3 995 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 BHLHA9Q7RTU4 235 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 NECAB3Q96P71 396 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 PDGFDQ9GZP0 370 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 PRDM6Q9NQX0 595 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 STK32BQ9NY57 414 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 STOML1Q9UBI4 398 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 ABCA13Q86UQ4 5058 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 MGAMO43451 1857 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 A0A0G2JMZ2 1700 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 LRRC37A2A6NM11 1700 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 NUAK1O60285 661 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TRIM37O94972 964 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 COL8A1P27658 744 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PLP2Q04941 152 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PUS10Q3MIT2 529 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 SPOCD1Q6ZMY3 1216 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TRIM22Q8IYM9 498 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 DDX17Q92841 729 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 DDX27Q96GQ7 796 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 PGAP2Q9UHJ9 254 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 TSKSQ9UJT2 592 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 RTL1A6NKG5 1358 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PLXNA3P51805 1871 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 WDR17Q8IZU2 1322 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 MAP1AP78559 2803 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 FOXD2O60548 495 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 ECM2O94769 699 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 BRPF1P55201 1214 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 DHX9Q08211 1270 aaKnown RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 MLANAQ16655 118 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 FAM109BQ6ICB4 259 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 TTLL10Q6ZVT0 673 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 UBE2Q1Q7Z7E8 422 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 MARCH10Q8NA82 808 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 BANK1Q8NDB2 785 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 SNX27Q96L92 541 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PPP1R1BQ9UD71 204 aaPredicted RBP0.63□□□□□ -2.31
CEP290-203ENST00000547691 DNMT3LQ9UJW3 386 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 LEMD3Q9Y2U8 911 aa0.63□□□□□ -2.31
CEP290-203ENST00000547691 PRUNE2Q8WUY3 3088 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 MYH14Q7Z406 1995 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 NUP155O75694 1391 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 KIF24Q5T7B8 1368 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 RFXAPO00287 272 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 CDK4P11802 303 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 TMEM132EQ6IEE7 984 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 KRT28Q7Z3Y7 464 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 FLAD1Q8NFF5 587 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 LARP6Q9BRS8 491 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 KCNH6Q9H252 994 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 KDM2BQ8NHM5 1336 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 COL4A4P53420 1690 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 PLXNB2O15031 1838 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 DDX60LQ5H9U9 1706 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 SLC35F4A4IF30 521 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 GRXCR2A6NFK2 248 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 RGL2O15211 777 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 BMP7P18075 431 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 MAP2K2P36507 400 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 MAP2K1Q02750 393 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 PKN2Q16513 984 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 GDF6Q6KF10 455 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 SYDE1Q6ZW31 735 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 FOXP4Q8IVH2 680 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 ARMC2Q8NEN0 867 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 CARD10Q9BWT7 1032 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 BTG4Q9NY30 223 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 GGA1Q9UJY5 639 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 HCN2Q9UL51 889 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 IGSF1Q8N6C5 1336 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 COL1A1P02452 1464 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 LOC285556D6RIA3 1793 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 ERBB2P04626 1255 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 TIMP2P16035 220 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 UBTFP17480 764 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 BMP8BP34820 402 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 LBRQ14739 615 aaKnown RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 PLCL1Q15111 1095 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 ECM1Q16610 540 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 CRB2Q5IJ48 1285 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 VASH1Q7L8A9 365 aaPredicted RBP0.62□□□□□ -2.31
CEP290-203ENST00000547691 P3H3Q8IVL6 736 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 FAM168AQ92567 244 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 OSBPL1AQ9BXW6 950 aa0.62□□□□□ -2.31
CEP290-203ENST00000547691 MCOLN1Q9GZU1 580 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms