RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 TTC19Q6DKK2 380 aaPredicted RBP17.4■□□□□ 0.38
BRF1-211ENST00000547530 MIGA1Q8NAN2 632 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 PSMB7Q99436 277 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 VPS16Q9H269 839 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 TEX33O43247 280 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
BRF1-211ENST00000547530 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
BRF1-211ENST00000547530 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 SMARCC2Q8TAQ2 1214 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 RTEL1Q9NZ71 1219 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 FANCGO15287 622 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 PDIA6Q15084 440 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 LEKR1Q6ZMV7 388 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 ARAP3Q8WWN8 1544 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 CBFA2T2O43439 604 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 SHC4Q6S5L8 630 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 XAGE2Q96GT9 111 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 CABP5Q9NP86 173 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 GUCA1BQ9UMX6 200 aa17.39■□□□□ 0.37
BRF1-211ENST00000547530 ERBB3P21860 1342 aa17.38■□□□□ 0.37
BRF1-211ENST00000547530 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
BRF1-211ENST00000547530 ACRBPQ8NEB7 543 aa17.38■□□□□ 0.37
BRF1-211ENST00000547530 PRDM1O75626 825 aa17.38■□□□□ 0.37
BRF1-211ENST00000547530 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
BRF1-211ENST00000547530 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
BRF1-211ENST00000547530 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
BRF1-211ENST00000547530 FMR1Q06787 632 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRF1-211ENST00000547530 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
BRF1-211ENST00000547530 FOXR1Q6PIV2 292 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
BRF1-211ENST00000547530 KCNB2Q92953 911 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 NCAPHQ15003 741 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 AK7Q96M32 723 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
BRF1-211ENST00000547530 ABL1P00519 1130 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 NUP88Q99567 741 aaPredicted RBP17.37■□□□□ 0.37
BRF1-211ENST00000547530 ABCF2Q9UG63 623 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
BRF1-211ENST00000547530 ZBTB43O43298 467 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 AIDAQ96BJ3 306 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 MRPL44Q9H9J2 332 aaKnown RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 LONRF2Q1L5Z9 754 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 GSPT2Q8IYD1 628 aaKnown RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 SLF1Q9BQI6 1058 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 NRKQ7Z2Y5 1582 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 KIF5CO60282 957 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 CYP2C19P33261 490 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 SF3A3Q12874 501 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■■■■ 42.3
BRF1-211ENST00000547530 CC2D1AQ6P1N0 951 aaPredicted RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 GOLGA6L1Q8N7Z2 621 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
BRF1-211ENST00000547530 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 ADAM21Q9UKJ8 722 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 PARP3Q9Y6F1 533 aa17.36■□□□□ 0.37
BRF1-211ENST00000547530 VWA3AA6NCI4 1184 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 H2AFXP16104 143 aaPredicted RBP17.35■□□□□ 0.37
BRF1-211ENST00000547530 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 TADA3O75528 432 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
BRF1-211ENST00000547530 TDO2P48775 406 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 EXOSC10Q01780 885 aaKnown RBP17.35■□□□□ 0.37
BRF1-211ENST00000547530 CYB5R4Q7L1T6 521 aa17.35■□□□□ 0.37
BRF1-211ENST00000547530 RIN2Q8WYP3 895 aaPredicted RBP17.35■□□□□ 0.37
BRF1-211ENST00000547530 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.35■□□□□ 0.37
BRF1-211ENST00000547530 SYCP1Q15431 976 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 ENOX2Q16206 610 aaKnown RBP17.34■□□□□ 0.37
BRF1-211ENST00000547530 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 NCAPH2Q6IBW4 605 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 METTL16Q86W50 562 aaKnown RBP17.34■□□□□ 0.37
BRF1-211ENST00000547530 DIS3L2Q8IYB7 885 aaKnown RBP17.34■□□□□ 0.37
BRF1-211ENST00000547530 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 GOLGA1Q92805 767 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 CDC42BPGQ6DT37 1551 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 H3BQF6 201 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 ZNF174Q15697 407 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 USPL1Q5W0Q7 1092 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 REXO1L1PQ8IX06 675 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
BRF1-211ENST00000547530 USP31Q70CQ4 1352 aa17.33■□□□□ 0.37
BRF1-211ENST00000547530 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.37
BRF1-211ENST00000547530 EYA2O00167 538 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms