RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
BEST3-208ENST00000547208 TNNI2P48788 182 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 FAM83AQ86UY5 434 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 SLC10A4Q96EP9 437 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 XAGE2Q96GT9 111 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 WNK4Q96J92 1243 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
BEST3-208ENST00000547208 DENND2AQ9ULE3 1009 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
BEST3-208ENST00000547208 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
BEST3-208ENST00000547208 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
BEST3-208ENST00000547208 ANKRD13AQ8IZ07 590 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.37
BEST3-208ENST00000547208 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 CFHR5Q9BXR6 569 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 PCDH10Q9P2E7 1040 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
BEST3-208ENST00000547208 PHIPQ8WWQ0 1821 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 PTPRFP10586 1907 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
BEST3-208ENST00000547208 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 R3HDMLQ9H3Y0 253 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
BEST3-208ENST00000547208 MANSC4A6NHS7 340 aaPredicted RBP12.75□□□□□ -0.37
BEST3-208ENST00000547208 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
BEST3-208ENST00000547208 GAKO14976 1311 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 NFIAQ12857 509 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 VGLL4Q14135 290 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 MVPQ14764 893 aaKnown RBP12.75□□□□□ -0.37
BEST3-208ENST00000547208 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
BEST3-208ENST00000547208 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
BEST3-208ENST00000547208 ZNF384Q8TF68 577 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 ATAD5Q96QE3 1844 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 ELP3Q9H9T3 547 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
BEST3-208ENST00000547208 DOCK1Q14185 1865 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 TESPA1A2RU30 521 aaPredicted RBP12.74□□□□□ -0.37
BEST3-208ENST00000547208 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
BEST3-208ENST00000547208 INHBEP58166 350 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 PI16Q6UXB8 463 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
BEST3-208ENST00000547208 ZNF296Q8WUU4 475 aaPredicted RBP12.74□□□□□ -0.37
BEST3-208ENST00000547208 OPTNQ96CV9 577 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 HMG20BQ9P0W2 317 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
BEST3-208ENST00000547208 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
BEST3-208ENST00000547208 MKI67P46013 3256 aaKnown RBP12.73□□□□□ -0.37
BEST3-208ENST00000547208 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 GPR25O00155 361 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
BEST3-208ENST00000547208 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
BEST3-208ENST00000547208 NEUROD6Q96NK8 337 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 PTPN18Q99952 460 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
BEST3-208ENST00000547208 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
BEST3-208ENST00000547208 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 MCAMP43121 646 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 TCP10Q12799 353 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 CTU1Q7Z7A3 348 aaKnown RBP12.72□□□□□ -0.37
BEST3-208ENST00000547208 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 SPATA5Q8NB90 893 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
BEST3-208ENST00000547208 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 SPDYE5A6NIY4 337 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.37
BEST3-208ENST00000547208 MECOMQ03112 1051 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
BEST3-208ENST00000547208 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
BEST3-208ENST00000547208 WRNIP1Q96S55 665 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.37
BEST3-208ENST00000547208 HTTP42858 3142 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 GPR75-ASB3A0A0A6YYF3 556 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
BEST3-208ENST00000547208 INPP5BP32019 993 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 RGS3P49796 1198 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
BEST3-208ENST00000547208 MIGA2Q7L4E1 593 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
BEST3-208ENST00000547208 BRI3BPQ8WY22 251 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms