RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 GPATCH8Q9UKJ3 1502 aaKnown RBP11.69□□□□□ -0.54
SOD2-216ENST00000546260 HGSO14964 777 aaPredicted RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 EIF3HO15372 352 aaKnown RBP eCLIP11.68□□□□□ -0.54
SOD2-216ENST00000546260 TRAF1Q13077 416 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 TSC22D3Q99576 134 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 SELENOOQ9BVL4 669 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 SLC40A1Q9NP59 571 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 TTC21BQ7Z4L5 1316 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 TFRCP02786 760 aaKnown RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 CCT6AP40227 531 aaKnown RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 VAV2P52735 878 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 RALYLQ86SE5 291 aaKnown RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 NOA1Q8NC60 698 aaKnown RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 PARD3BQ8TEW8 1205 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 HNRNPLLQ8WVV9 542 aaKnown RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 HAUS2Q9NVX0 235 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 BIN2Q9UBW5 565 aaPredicted RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 KCNJ6P48051 423 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 IFFO1Q0D2I5 559 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 RESTQ13127 1097 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 LRRC23Q53EV4 343 aaPredicted RBP11.68□□□□□ -0.54
SOD2-216ENST00000546260 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 ANKZF1Q9H8Y5 726 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 SAR1BQ9Y6B6 198 aa11.68□□□□□ -0.54
SOD2-216ENST00000546260 SAMD9Q5K651 1589 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 MYBL1P10243 752 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 IDEP14735 1019 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 CCDC170Q8IYT3 715 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 SAFBQ15424 915 aaKnown RBP eCLIP11.67□□□□□ -0.54
SOD2-216ENST00000546260 IMMTQ16891 758 aaKnown RBP11.67□□□□□ -0.54
SOD2-216ENST00000546260 DBN1Q16643 649 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
SOD2-216ENST00000546260 CACNA2D3Q8IZS8 1091 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 TRIM4Q9C037 500 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 MRPL44Q9H9J2 332 aaKnown RBP11.67□□□□□ -0.54
SOD2-216ENST00000546260 SYNMO15061 1565 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 EIF2AK4Q9P2K8 1649 aaKnown RBP11.67□□□□□ -0.54
SOD2-216ENST00000546260 GOLGA6L10A0A0M3HER8 536 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 FYB1O15117 783 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
SOD2-216ENST00000546260 E9PCH4 1651 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 POLE2P56282 527 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 ADALQ6DHV7 355 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 KCNV1Q6PIU1 500 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 SH2D3CQ8N5H7 860 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 PFKFB2O60825 505 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 PFKFB1P16118 471 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 GUCY2FP51841 1108 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 NNTQ13423 1086 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 HPCAL4Q9UM19 191 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 SOS1Q07889 1333 aaPredicted RBP11.66□□□□□ -0.54
SOD2-216ENST00000546260 CDC25CP30307 473 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
SOD2-216ENST00000546260 SNX1Q13596 522 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 KCNB1Q14721 858 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 SPA17Q15506 151 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 TSGA10IPQ3SY00 556 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 PREPLQ4J6C6 727 aaPredicted RBP11.66□□□□□ -0.54
SOD2-216ENST00000546260 HDGFL1Q5TGJ6 251 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 ADGRL2O95490 1459 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 ZNF518AQ6AHZ1 1483 aa11.66□□□□□ -0.54
SOD2-216ENST00000546260 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 SRGAP2O75044 1071 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 GUCY1A3Q02108 690 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 CCDC63Q8NA47 563 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
SOD2-216ENST00000546260 LRRD1A4D1F6 860 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 AFMP43652 599 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 CCDC13Q8IYE1 715 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 PTPRGP23470 1445 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 KRT86O43790 486 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 USP5P45974 858 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 LMNTD2Q8IXW0 634 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 ACTR5Q9H9F9 607 aaPredicted RBP11.65□□□□□ -0.54
SOD2-216ENST00000546260 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
SOD2-216ENST00000546260 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 TCHHQ07283 1943 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 SEC24CP53992 1094 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 PDCD2Q16342 344 aaPredicted RBP11.64□□□□□ -0.55
SOD2-216ENST00000546260 RBM43Q6ZSC3 357 aaKnown RBP11.64□□□□□ -0.55
SOD2-216ENST00000546260 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
SOD2-216ENST00000546260 CD109Q6YHK3 1445 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 TRAPPC8Q9Y2L5 1435 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 MYBL2P10244 700 aa11.64□□□□□ -0.55
SOD2-216ENST00000546260 C2orf54Q08AI8 447 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 326.7 ms