RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SLC10A3P09131 477 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 ZNF157P51786 506 aaPredicted RBP14.56□□□□□ -0.08
YBX3-217ENST00000546164 LDLRAD1Q5T700 205 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 MOB2Q70IA6 237 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 ARMC9Q7Z3E5 817 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 DZIP1Q86YF9 867 aaKnown RBP14.56□□□□□ -0.08
YBX3-217ENST00000546164 SLF2Q8IX21 1173 aa14.56□□□□□ -0.08
YBX3-217ENST00000546164 CCDC8Q9H0W5 538 aaPredicted RBP14.56□□□□□ -0.08
YBX3-217ENST00000546164 TCP10L2B9ZVM9 353 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 UBE2Q2LH0YL09 131 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 PPP1R12BO60237 982 aaPredicted RBP14.55□□□□□ -0.08
YBX3-217ENST00000546164 AOC2O75106 756 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 GRM1Q13255 1194 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 TTLL12Q14166 644 aaPredicted RBP14.55□□□□□ -0.08
YBX3-217ENST00000546164 NBPF12Q5TAG4 269 aaPredicted RBP14.55□□□□□ -0.08
YBX3-217ENST00000546164 CDC42EP5Q6NZY7 148 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 AACSQ86V21 672 aa14.55□□□□□ -0.08
YBX3-217ENST00000546164 SP7Q8TDD2 431 aaPredicted RBP14.55□□□□□ -0.08
YBX3-217ENST00000546164 RPAP1Q9BWH6 1393 aaPredicted RBP14.55□□□□□ -0.08
YBX3-217ENST00000546164 CACNB3P54284 484 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 MECOMQ03112 1051 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 TBC1D9Q6ZT07 1266 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 RASAL3Q86YV0 1011 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
YBX3-217ENST00000546164 ZNF384Q8TF68 577 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 NSUN4Q96CB9 384 aaKnown RBP14.54□□□□□ -0.08
YBX3-217ENST00000546164 TMEM39BQ9GZU3 492 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 IL1RAPL2Q9NP60 686 aa14.54□□□□□ -0.08
YBX3-217ENST00000546164 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
YBX3-217ENST00000546164 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 MROH7-TTC4A0A0A0MT08 1334 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 GSTO1P78417 241 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 AIDAQ96BJ3 306 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 ZIC5Q96T25 663 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 AKAP11Q9UKA4 1901 aa14.53□□□□□ -0.08
YBX3-217ENST00000546164 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 USP2O75604 605 aaPredicted RBP14.52□□□□□ -0.09
YBX3-217ENST00000546164 MAP4K4O95819 1239 aaPredicted RBP14.52□□□□□ -0.09
YBX3-217ENST00000546164 CYP2E1P05181 493 aaPredicted RBP14.52□□□□□ -0.09
YBX3-217ENST00000546164 LDHCP07864 332 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 ZAP70P43403 619 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
YBX3-217ENST00000546164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.52□□□□□ -0.09
YBX3-217ENST00000546164 FAM151AQ8WW52 585 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 IDI2Q9BXS1 227 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 DCTPP1Q9H773 170 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 SNRKQ9NRH2 765 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 USP40Q9NVE5 1235 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 LRP2BPQ9P2M1 347 aa14.52□□□□□ -0.09
YBX3-217ENST00000546164 FOXN1O15353 648 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 CA12O43570 354 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 BTDP43251 543 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
YBX3-217ENST00000546164 KIF23Q02241 960 aaPredicted RBP14.51□□□□□ -0.09
YBX3-217ENST00000546164 NFIAQ12857 509 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 PRKG1Q13976 671 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 TMED8Q6PL24 325 aaPredicted RBP14.51□□□□□ -0.09
YBX3-217ENST00000546164 HOOK2Q96ED9 719 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 LRRCC1Q9C099 1032 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 FZD1Q9UP38 647 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 PCDHB15Q9Y5E8 787 aa14.51□□□□□ -0.09
YBX3-217ENST00000546164 APBB1O00213 710 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 ENTPD3O75355 529 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 IFIT2P09913 472 aaKnown RBP14.5□□□□□ -0.09
YBX3-217ENST00000546164 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
YBX3-217ENST00000546164 RHBDL3P58872 404 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 AAMPQ13685 434 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 BEGAINQ9BUH8 593 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 MYH2Q9UKX2 1941 aa14.5□□□□□ -0.09
YBX3-217ENST00000546164 WDHD1O75717 1129 aaPredicted RBP14.49□□□□□ -0.09
YBX3-217ENST00000546164 ANKRD13AQ8IZ07 590 aa14.49□□□□□ -0.09
YBX3-217ENST00000546164 CSRNP1Q96S65 589 aa14.49□□□□□ -0.09
YBX3-217ENST00000546164 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
YBX3-217ENST00000546164 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
YBX3-217ENST00000546164 ZBTB48P10074 688 aaPredicted RBP14.48□□□□□ -0.09
YBX3-217ENST00000546164 HSPA8P11142 646 aaKnown RBP14.48□□□□□ -0.09
YBX3-217ENST00000546164 RGS3P49796 1198 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 PPP4CP60510 307 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 SPRYD7Q5W111 196 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 DCAF15Q66K64 600 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 NAA16Q6N069 864 aaPredicted RBP14.48□□□□□ -0.09
YBX3-217ENST00000546164 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.48□□□□□ -0.09
YBX3-217ENST00000546164 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 CLMNQ96JQ2 1002 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
YBX3-217ENST00000546164 ATP5JP18859 108 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 MAP3K9P80192 1104 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 TCP10Q12799 353 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 TTF1Q15361 905 aaPredicted RBP14.47□□□□□ -0.09
YBX3-217ENST00000546164 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.47□□□□□ -0.09
YBX3-217ENST00000546164 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
YBX3-217ENST00000546164 SAGE1Q9NXZ1 904 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
YBX3-217ENST00000546164 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms