RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 HDXQ7Z353 690 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CIT-217ENST00000545913 NSFL1CQ9UNZ2 370 aaKnown RBP13.14□□□□□ -0.31
CIT-217ENST00000545913 VWA3AA6NCI4 1184 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 MYL5Q02045 173 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 SLC8A3P57103 927 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 CFAP157Q5JU67 520 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
CIT-217ENST00000545913 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 ATP10BO94823 1461 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 BACH1O14867 736 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 CHMLP26374 656 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 IFT81Q8WYA0 676 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 WDR62O43379 1518 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 STIM2Q9P246 746 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 POLKQ9UBT6 870 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 AGTPBP1Q9UPW5 1226 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 STX10O60499 249 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 DEXIO95424 95 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 PUM3Q15397 648 aaKnown RBP13.13□□□□□ -0.31
CIT-217ENST00000545913 INF2Q27J81 1249 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 FAM169AQ9Y6X4 670 aa13.13□□□□□ -0.31
CIT-217ENST00000545913 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 TUBB2AQ13885 445 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 SETDB1Q15047 1291 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 MTHFSDQ2M296 383 aaKnown RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 TUBB2BQ9BVA1 445 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 ZWINTO95229 277 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 FNBP1Q96RU3 617 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 STX17P56962 302 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 XRCC6P12956 609 aaKnown RBP eCLIP13.12□□□□□ -0.31
CIT-217ENST00000545913 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 FAM76AQ8TAV0 307 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 KRT5P13647 590 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 RAPGEF1Q13905 1077 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
CIT-217ENST00000545913 CCDC110Q8TBZ0 833 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 VPS18Q9P253 973 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 AOX1Q06278 1338 aa13.12□□□□□ -0.31
CIT-217ENST00000545913 CALUO43852 315 aaPredicted RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 VAMP4O75379 141 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 TAF12Q16514 161 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 ZEB2O60315 1214 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 UTP11Q9Y3A2 253 aaKnown RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 GMNNO75496 209 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 UBLCP1Q8WVY7 318 aaPredicted RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 TTC16Q8NEE8 873 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 BABAM1Q9NWV8 329 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 TRAF5O00463 557 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 POLD1P28340 1107 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
CIT-217ENST00000545913 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 A0A1W2PP64 1363 aa13.11□□□□□ -0.31
CIT-217ENST00000545913 MKRN1Q9UHC7 482 aaKnown RBP13.1□□□□□ -0.31
CIT-217ENST00000545913 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
CIT-217ENST00000545913 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
CIT-217ENST00000545913 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 PICK1Q9NRD5 415 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
CIT-217ENST00000545913 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 CLUL1Q15846 466 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 LETM2Q2VYF4 491 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms