RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 CPA4Q9UI42 421 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 UTYO14607 1347 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 FANCIQ9NVI1 1328 aa18.65■□□□□ 0.58
RTN3-214ENST00000545432 ZBTB7BO15156 539 aaPredicted RBP18.64■□□□□ 0.57
RTN3-214ENST00000545432 BCRP11274 1271 aa18.64■□□□□ 0.57
RTN3-214ENST00000545432 CCL5P13501 91 aa18.64■□□□□ 0.57
RTN3-214ENST00000545432 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
RTN3-214ENST00000545432 PDHXO00330 501 aa18.63■□□□□ 0.57
RTN3-214ENST00000545432 INPP5BP32019 993 aa18.63■□□□□ 0.57
RTN3-214ENST00000545432 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
RTN3-214ENST00000545432 NOL9Q5SY16 702 aaKnown RBP18.63■□□□□ 0.57
RTN3-214ENST00000545432 FAM151AQ8WW52 585 aa18.63■□□□□ 0.57
RTN3-214ENST00000545432 NR2E3Q9Y5X4 410 aa18.63■□□□□ 0.57
RTN3-214ENST00000545432 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
RTN3-214ENST00000545432 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
RTN3-214ENST00000545432 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.62■□□□□ 0.57
RTN3-214ENST00000545432 RAET1EQ8TD07 263 aa18.62■□□□□ 0.57
RTN3-214ENST00000545432 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
RTN3-214ENST00000545432 C9orf78Q9NZ63 289 aaPredicted RBP18.62■□□□□ 0.57
RTN3-214ENST00000545432 MAST3O60307 1309 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 CXCL11O14625 94 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 PDE8BO95263 885 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 SGPL1O95470 568 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 UBXN2AP68543 259 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 EXOSC9Q06265 439 aaKnown RBP18.61■□□□□ 0.57
RTN3-214ENST00000545432 GPAT2Q6NUI2 795 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 U2AF1L4Q8WU68 220 aaKnown RBP18.61■□□□□ 0.57
RTN3-214ENST00000545432 RNF208Q9H0X6 261 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 TMOD2Q9NZR1 351 aa18.61■□□□□ 0.57
RTN3-214ENST00000545432 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
RTN3-214ENST00000545432 FGFR2P21802 821 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 CAVIN4Q5BKX8 364 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 VPS37DQ86XT2 251 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 SLAIN1Q8ND83 568 aa18.6■□□□□ 0.57
RTN3-214ENST00000545432 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
RTN3-214ENST00000545432 DLL1O00548 723 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 BCAMP50895 628 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 PRKCZQ05513 592 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
RTN3-214ENST00000545432 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 MIGA2Q7L4E1 593 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 SRCIN1Q9C0H9 1055 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
RTN3-214ENST00000545432 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
RTN3-214ENST00000545432 SLC17A8Q8NDX2 589 aa18.58■□□□□ 0.56
RTN3-214ENST00000545432 ZBTB22O15209 634 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 FARP2O94887 1054 aaPredicted RBP18.57■□□□□ 0.56
RTN3-214ENST00000545432 FCGRTP55899 365 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 IRF5Q13568 498 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 PARK7Q99497 189 aaKnown RBP18.57■□□□□ 0.56
RTN3-214ENST00000545432 CRISPLD2Q9H0B8 497 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 UNC93B1Q9H1C4 597 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 GABRQQ9UN88 632 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 SLC45A1Q9Y2W3 748 aa18.57■□□□□ 0.56
RTN3-214ENST00000545432 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
RTN3-214ENST00000545432 GPR153Q6NV75 609 aa18.56■□□□□ 0.56
RTN3-214ENST00000545432 CDC42EP5Q6NZY7 148 aa18.56■□□□□ 0.56
RTN3-214ENST00000545432 BICC1Q9H694 974 aaKnown RBP18.56■□□□□ 0.56
RTN3-214ENST00000545432 ATRNL1Q5VV63 1379 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 PHF20L1A8MW92 1017 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
RTN3-214ENST00000545432 BMP8BP34820 402 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 METTL24Q5JXM2 366 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
RTN3-214ENST00000545432 PAK6Q9NQU5 681 aaPredicted RBP18.55■□□□□ 0.56
RTN3-214ENST00000545432 FAM198AQ9UFP1 575 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 CUL9Q8IWT3 2517 aa18.55■□□□□ 0.56
RTN3-214ENST00000545432 A0A0G2JLL6 359 aaPredicted RBP18.54■□□□□ 0.56
RTN3-214ENST00000545432 ADCY3O60266 1144 aa18.54■□□□□ 0.56
RTN3-214ENST00000545432 CYP2C8P10632 490 aa18.54■□□□□ 0.56
RTN3-214ENST00000545432 NFIAQ12857 509 aa18.54■□□□□ 0.56
RTN3-214ENST00000545432 FASTKD5Q7L8L6 764 aaKnown RBP18.54■□□□□ 0.56
RTN3-214ENST00000545432 PRRT2Q7Z6L0 340 aaPredicted RBP18.54■□□□□ 0.56
RTN3-214ENST00000545432 BIN2Q9UBW5 565 aaPredicted RBP18.54■□□□□ 0.56
RTN3-214ENST00000545432 DAGLAQ9Y4D2 1042 aa18.54■□□□□ 0.56
RTN3-214ENST00000545432 ECM2O94769 699 aaPredicted RBP18.53■□□□□ 0.56
RTN3-214ENST00000545432 FLT3LGP49771 235 aa18.53■□□□□ 0.56
RTN3-214ENST00000545432 GDF15Q99988 308 aa18.53■□□□□ 0.56
RTN3-214ENST00000545432 AFG3L2Q9Y4W6 797 aa18.53■□□□□ 0.56
RTN3-214ENST00000545432 COL6A3P12111 3177 aa18.52■□□□□ 0.56
RTN3-214ENST00000545432 EVI5O60447 810 aa18.52■□□□□ 0.56
RTN3-214ENST00000545432 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.56
RTN3-214ENST00000545432 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
RTN3-214ENST00000545432 LRCH3Q96II8 777 aa18.52■□□□□ 0.56
RTN3-214ENST00000545432 IDI2Q9BXS1 227 aa18.52■□□□□ 0.56
RTN3-214ENST00000545432 PTPRAP18433 802 aa18.51■□□□□ 0.55
RTN3-214ENST00000545432 MNX1P50219 401 aaPredicted RBP18.51■□□□□ 0.55
RTN3-214ENST00000545432 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
RTN3-214ENST00000545432 ZFPM1Q8IX07 1006 aa18.51■□□□□ 0.55
RTN3-214ENST00000545432 STAP2Q9UGK3 403 aa18.51■□□□□ 0.55
RTN3-214ENST00000545432 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 INHAP05111 366 aa18.5■□□□□ 0.55
RTN3-214ENST00000545432 RFX5P48382 616 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms