RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TRIM4Q9C037 500 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 XPO4Q9C0E2 1151 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 BRD8Q9H0E9 1235 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ANTXR1Q9H6X2 564 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 SENP2Q9HC62 589 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CD248Q9HCU0 757 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF446Q9NWS9 450 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 TBC1D7Q9P0N9 293 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 DDX25Q9UHL0 483 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 PAIP2BQ9ULR5 123 aaKnown RBP5.86□□□□□ -1.47
UBE4A-203ENST00000545354 IVNS1ABPQ9Y6Y0 642 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 UHRF1BP1LA0JNW5 1464 aa5.86□□□□□ -1.47
UBE4A-203ENST00000545354 MAGI1Q96QZ7 1491 aaPredicted RBP5.85□□□□□ -1.47
UBE4A-203ENST00000545354 RPSAP08865 295 aaKnown RBP5.85□□□□□ -1.47
UBE4A-203ENST00000545354 DESP17661 470 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TNNI2P48788 182 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 HDAC4P56524 1084 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 MYBPC3Q14896 1274 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 AKNAD1Q5T1N1 836 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 EGFLAMQ63HQ2 1017 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 NUGGCQ68CJ6 796 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 SDE2Q6IQ49 451 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TTC39CQ8N584 583 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 OSBPL10Q9BXB5 764 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 MRPL46Q9H2W6 279 aaKnown RBP5.85□□□□□ -1.47
UBE4A-203ENST00000545354 SYNCQ9H7C4 482 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TCF7L2Q9NQB0 619 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 IP6K2Q9UHH9 426 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 POLG2Q9UHN1 485 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TMED5Q9Y3A6 229 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 TTLL3Q9Y4R7 772 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 GMEB1Q9Y692 573 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 SOGA1O94964 1423 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 SYNJ2O15056 1496 aa5.85□□□□□ -1.47
UBE4A-203ENST00000545354 CHUKO15111 745 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 PER1O15534 1290 aaPredicted RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RTN2O75298 545 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 AP1G2O75843 785 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 FESP07332 822 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 TROVE2P10155 538 aaKnown RBP eCLIP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RBP3P10745 1247 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CCT6AP40227 531 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 FNTAP49354 379 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF445P59923 1031 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ZBED6P86452 979 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 MAP7Q14244 749 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CFAP58Q5T655 872 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RNF187Q5TA31 235 aaPredicted RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 SAPCD2Q86UD0 394 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 SLC43A3Q8NBI5 491 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 B4GALNT2Q8NHY0 566 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 GPT2Q8TD30 523 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ARHGAP45Q92619 1136 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 SPACA7Q96KW9 195 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 SPAG5Q96R06 1193 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 TANGO6Q9C0B7 1094 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 AS3MTQ9HBK9 375 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 STIM2Q9P246 746 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CFDP1Q9UEE9 299 aaPredicted RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 MCM8Q9UJA3 840 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CARD8Q9Y2G2 431 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 MRPL11Q9Y3B7 192 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RABGAP1Q9Y3P9 1069 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC88BA6NC98 1476 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 A0A1W2PRQ8 180 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ABLIM1O14639 778 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 TRIM66O15016 1216 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CYTH3O43739 400 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 MGEA5O60502 916 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 FGAP02671 866 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RPL13P26373 211 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ACTN2P35609 894 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 DYNC1I2Q13409 638 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 RAPGEF1Q13905 1077 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 FAM133BQ5BKY9 247 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 DUSP27Q5VZP5 1158 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 CLEC17AQ6ZS10 378 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 NEK10Q6ZWH5 1172 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 BRAPQ7Z569 592 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 TADA2BQ86TJ2 420 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF687Q8N1G0 1237 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 NGDNQ8NEJ9 315 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ZFAND2BQ8WV99 257 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 PPP2R3CQ969Q6 453 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 ERP27Q96DN0 273 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 PAWRQ96IZ0 340 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 SRRTQ9BXP5 876 aaKnown RBP5.84□□□□□ -1.47
UBE4A-203ENST00000545354 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 KRTAP3-2Q9BYR7 98 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 KIAA1468Q9P260 1216 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 PRR12Q9ULL5 1215 aa5.84□□□□□ -1.47
UBE4A-203ENST00000545354 EIF3CLB5ME19 914 aaKnown RBP5.83□□□□□ -1.48
UBE4A-203ENST00000545354 BOLA2-SMG1P6H3BVE0 249 aa5.83□□□□□ -1.48
UBE4A-203ENST00000545354 EVI5O60447 810 aa5.83□□□□□ -1.48
UBE4A-203ENST00000545354 NEMFO60524 1076 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms