RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 DRC1Q96MC2 740 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 USP26Q9BXU7 913 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 BHLHE41Q9C0J9 482 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-222ENST00000545308 SOX17Q9H6I2 414 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-222ENST00000545308 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 ADGRE2Q9UHX3 823 aa6.4□□□□□ -1.38
SNHG1-222ENST00000545308 EIF1AYO14602 144 aaKnown RBP6.39□□□□□ -1.39
SNHG1-222ENST00000545308 F13BP05160 661 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 YBX3P16989 372 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNHG1-222ENST00000545308 RXRBP28702 533 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 GNA15P30679 374 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 LEMD3Q9Y2U8 911 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 CCDC180Q9P1Z9 1646 aa6.39□□□□□ -1.39
SNHG1-222ENST00000545308 DLGAP3O95886 979 aa6.38□□□□□ -1.39
SNHG1-222ENST00000545308 CTSHP09668 335 aa6.38□□□□□ -1.39
SNHG1-222ENST00000545308 ESRRAP11474 423 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-222ENST00000545308 FOSL1P15407 271 aa6.38□□□□□ -1.39
SNHG1-222ENST00000545308 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-222ENST00000545308 EXOSC6Q5RKV6 272 aaKnown RBP6.38□□□□□ -1.39
SNHG1-222ENST00000545308 FBXL6Q8N531 539 aa6.38□□□□□ -1.39
SNHG1-222ENST00000545308 FBF1Q8TES7 1133 aa6.38□□□□□ -1.39
SNHG1-222ENST00000545308 METTL5Q9NRN9 209 aaKnown RBP6.38□□□□□ -1.39
SNHG1-222ENST00000545308 FAM95CA0A1B0GW59 222 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 MSMPQ1L6U9 139 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 PEAR1Q5VY43 1037 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-222ENST00000545308 ASAP3Q8TDY4 903 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 RNF34Q969K3 372 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 FOXD3Q9UJU5 478 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-222ENST00000545308 AK5Q9Y6K8 562 aa6.37□□□□□ -1.39
SNHG1-222ENST00000545308 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 DRD2P14416 443 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 ZNF76P36508 570 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 USP11P51784 963 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 USPL1Q5W0Q7 1092 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 PAOXQ6QHF9 649 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 SHISA5Q8N114 240 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 C2CD4AQ8NCU7 369 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-222ENST00000545308 FBLIM1Q8WUP2 373 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 LATS2Q9NRM7 1088 aa6.36□□□□□ -1.39
SNHG1-222ENST00000545308 EIF4EBP3O60516 100 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 PRNPP04156 253 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 ITGAEP38570 1179 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 GSTM4Q03013 218 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 TINF2Q9BSI4 451 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 METTL22Q9BUU2 404 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
SNHG1-222ENST00000545308 ANGEL1Q9UNK9 670 aaKnown RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 ARID1BQ8NFD5 2236 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-222ENST00000545308 METTL12A8MUP2 240 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-222ENST00000545308 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.34□□□□□ -1.394e-12■■□□□ 12.4
SNHG1-222ENST00000545308 CRELD1Q96HD1 420 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 OSBPL7Q9BZF2 842 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 TGIF2Q9GZN2 237 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 ZFYVE28Q9HCC9 887 aa6.34□□□□□ -1.39
SNHG1-222ENST00000545308 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-222ENST00000545308 NEFLP07196 543 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 ADMP35318 185 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
SNHG1-222ENST00000545308 ZAR1Q86SH2 424 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 EPS8L3Q8TE67 593 aaKnown RBP6.33□□□□□ -1.4
SNHG1-222ENST00000545308 UBXN4Q92575 508 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 FBXL18Q96ME1 805 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 YIPF2Q9BWQ6 316 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 ACBD3Q9H3P7 528 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 PRKAG2Q9UGJ0 569 aa6.33□□□□□ -1.4
SNHG1-222ENST00000545308 CYP26A1O43174 497 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 ADH5P11766 374 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 EIF4BP23588 611 aaKnown RBP6.32□□□□□ -1.4
SNHG1-222ENST00000545308 TNNI2P48788 182 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 NFXL1Q6ZNB6 911 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 VSIG10LQ86VR7 867 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 GATA6Q92908 595 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 SPG7Q9UQ90 795 aa6.32□□□□□ -1.4
SNHG1-222ENST00000545308 A0A096LPE4 126 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 A0A1W2PPZ6 126 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 POLR3DP05423 398 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-222ENST00000545308 PCDH1Q08174 1060 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 CCNJLQ8IV13 435 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 CLEC4MQ9H2X3 399 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-222ENST00000545308 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 CCSER2Q9H7U1 834 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 CAPN10Q9HC96 672 aa6.31□□□□□ -1.4
SNHG1-222ENST00000545308 BSDC1Q9NW68 430 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-222ENST00000545308 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms