RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ASIC1P78348 528 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-216ENST00000545170 ST13P4Q8IZP2 240 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-216ENST00000545170 TTC21AQ8NDW8 1320 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 ELP1O95163 1332 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 CFAP221Q4G0U5 840 aa9.62□□□□□ -0.87
ATXN3-216ENST00000545170 PPP1R12AO14974 1030 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 TBCAO75347 108 aaKnown RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 SYF2O95926 243 aaKnown RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 TADA2BQ86TJ2 420 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ARHGAP6O43182 974 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 SKIP12755 728 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ANKRD20A8PQ5CZ79 823 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ANKRD20A2Q5SQ80 823 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ANKRD20A1Q5TYW2 823 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 AFAP1L2Q8N4X5 818 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ZNF280CQ8ND82 737 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 LRRC2Q9BYS8 371 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 PAIP2BQ9ULR5 123 aaKnown RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-216ENST00000545170 GNPTABQ3T906 1256 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 Q6ZUG5 572 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC68Q9H2F9 335 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 SERPINI2O75830 405 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 SEC24BO95487 1268 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC159P0C7I6 412 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 TRIM27P14373 513 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 MTX1Q13505 466 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 NUTM2GQ5VZR2 741 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 ZNF354CQ86Y25 554 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 VPS16Q9H269 839 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 MKNK2Q9HBH9 465 aa9.61□□□□□ -0.87
ATXN3-216ENST00000545170 EIF3CLB5ME19 914 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 RWDD2BP57060 319 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 TERF2Q15554 542 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 KCTD16Q68DU8 428 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 BRF1Q92994 677 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 EIF3CQ99613 913 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 ATP8B1O43520 1251 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 HAND2P61296 217 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 FBXO18Q8NFZ0 1043 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 LEO1Q8WVC0 666 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 G3BP2Q9UN86 482 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 TMPOP42166 694 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 PSME1Q06323 249 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 SULT6B1Q6IMI4 303 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 MAK16Q9BXY0 300 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 A0A1B0GVL5 298 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 TAF7Q15545 349 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 CSRNP2Q9H175 543 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 CLSTN2Q9H4D0 955 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 NOP53Q9NZM5 478 aaKnown RBP9.6□□□□□ -0.87
ATXN3-216ENST00000545170 CTTNBP2NLQ9P2B4 639 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 KLF18A0A0U1RQI7 1052 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 SUN1O94901 812 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 PDHA1P08559 390 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 RAPGEF1Q13905 1077 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 MAP7D3Q8IWC1 876 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 EXOC4Q96A65 974 aa9.6□□□□□ -0.87
ATXN3-216ENST00000545170 MYCNP04198 464 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-216ENST00000545170 CUL5Q93034 780 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 ASIC3Q9UHC3 531 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 KDM1AO60341 852 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 TBC1D8O95759 1140 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 NCOA7Q8NI08 942 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 TSC22D4Q9Y3Q8 395 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 PLEKHO1Q53GL0 409 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-216ENST00000545170 DYDC2Q96IM9 177 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 SAR1BQ9Y6B6 198 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 ANKRD65E5RJM6 399 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 CHUKO15111 745 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 BMP15O95972 392 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 AK2P54819 239 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 NME8Q8N427 588 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 UBL4BQ8N7F7 174 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-216ENST00000545170 RMDN2Q96LZ7 410 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 AGTPBP1Q9UPW5 1226 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 ERBINQ96RT1 1412 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 CC2D2AQ9P2K1 1620 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
ATXN3-216ENST00000545170 SPOPO43791 374 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms