RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 UBXN2AP68543 259 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 HDLBPQ00341 1268 aaKnown RBP11.95□□□□□ -0.5
CHD4-212ENST00000545083 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 CCDC57Q2TAC2 916 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 APOBEC3HQ6NTF7 200 aaKnown RBP11.95□□□□□ -0.5
CHD4-212ENST00000545083 MIGA2Q7L4E1 593 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
CHD4-212ENST00000545083 CYP2C8P10632 490 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 CHAF1AQ13111 956 aaPredicted RBP11.94□□□□□ -0.5
CHD4-212ENST00000545083 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
CHD4-212ENST00000545083 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 BEND3Q5T5X7 828 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 FBXO33Q7Z6M2 555 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
CHD4-212ENST00000545083 UNC80Q8N2C7 3258 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 ADCY3O60266 1144 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 ELNP15502 786 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 Q7L0L9 218 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 GDF15Q99988 308 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 ZNF112Q9UJU3 913 aa11.93□□□□□ -0.5
CHD4-212ENST00000545083 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
CHD4-212ENST00000545083 INHAP05111 366 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 FLT3LGP49771 235 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 FCGRTP55899 365 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 DIS3LQ8TF46 1054 aaKnown RBP11.92□□□□□ -0.5
CHD4-212ENST00000545083 HOOK2Q96ED9 719 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 PAWRQ96IZ0 340 aaKnown RBP11.92□□□□□ -0.5
CHD4-212ENST00000545083 DEFB118Q96PH6 123 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 TMOD2Q9NZR1 351 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 ALPK3Q96L96 1907 aa11.92□□□□□ -0.5
CHD4-212ENST00000545083 GRM8O00222 908 aa11.91□□□□□ -0.5
CHD4-212ENST00000545083 TFRCP02786 760 aaKnown RBP11.91□□□□□ -0.5
CHD4-212ENST00000545083 DEFB123Q8N688 67 aa11.91□□□□□ -0.5
CHD4-212ENST00000545083 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
CHD4-212ENST00000545083 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
CHD4-212ENST00000545083 MRIQ9BWK5 157 aa11.91□□□□□ -0.5
CHD4-212ENST00000545083 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
CHD4-212ENST00000545083 PAK6Q9NQU5 681 aaPredicted RBP11.91□□□□□ -0.5
CHD4-212ENST00000545083 BMP8BP34820 402 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 BCAMP50895 628 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 TCP10Q12799 353 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 NOL9Q5SY16 702 aaKnown RBP11.9□□□□□ -0.5
CHD4-212ENST00000545083 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 FAM151AQ8WW52 585 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
CHD4-212ENST00000545083 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
CHD4-212ENST00000545083 VAMP4O75379 141 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 FRAT2O75474 233 aaPredicted RBP11.89□□□□□ -0.51
CHD4-212ENST00000545083 NFIAQ12857 509 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 LRRC24Q50LG9 513 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 HHIPL2Q6UWX4 724 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 C7orf61Q8IZ16 206 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 SUCLG2Q96I99 432 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
CHD4-212ENST00000545083 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
CHD4-212ENST00000545083 STXBP5LQ9Y2K9 1186 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 MGAMO43451 1857 aa11.89□□□□□ -0.51
CHD4-212ENST00000545083 MROH5Q6ZUA9 1318 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 CXCL11O14625 94 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
CHD4-212ENST00000545083 IRF5Q13568 498 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 CCDC27Q2M243 656 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
CHD4-212ENST00000545083 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 VCANP13611 3396 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 A0A0G2JLL6 359 aaPredicted RBP11.87□□□□□ -0.51
CHD4-212ENST00000545083 SYN1P17600 705 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 LRIT3Q3SXY7 679 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 NECAB2Q7Z6G3 386 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 PRRT2Q7Z6L0 340 aaPredicted RBP11.87□□□□□ -0.51
CHD4-212ENST00000545083 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHD4-212ENST00000545083 C9orf78Q9NZ63 289 aaPredicted RBP11.87□□□□□ -0.51
CHD4-212ENST00000545083 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 SUGT1Q9Y2Z0 365 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 DAGLAQ9Y4D2 1042 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 ZHX2Q9Y6X8 837 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 ATRNL1Q5VV63 1379 aa11.87□□□□□ -0.51
CHD4-212ENST00000545083 SPTBN5Q9NRC6 3674 aaKnown RBP11.87□□□□□ -0.51
CHD4-212ENST00000545083 MAST3O60307 1309 aa11.86□□□□□ -0.51
CHD4-212ENST00000545083 IL16Q14005 1332 aa11.86□□□□□ -0.51
CHD4-212ENST00000545083 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
CHD4-212ENST00000545083 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
CHD4-212ENST00000545083 CAPN2P17655 700 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms