RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PASKQ96RG2 1323 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 SNAP23O00161 211 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 EYA2O00167 538 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 PDE8BO95263 885 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 GNAI2P04899 355 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 USP17L8P0C7I0 530 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 KLRK1P26718 216 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
CPSF7-224ENST00000544990 GTF2IP78347 998 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 PTPN12Q05209 780 aaKnown RBP9.17□□□□□ -0.94
CPSF7-224ENST00000544990 TBC1D10BQ4KMP7 808 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-224ENST00000544990 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 VPS37DQ86XT2 251 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 ZNF687Q8N1G0 1237 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 TMEM57Q8N5G2 664 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 PGAP2Q9UHJ9 254 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 HDAC9Q9UKV0 1011 aa9.17□□□□□ -0.94
CPSF7-224ENST00000544990 POLR2AP24928 1970 aaKnown RBP9.16□□□□□ -0.94
CPSF7-224ENST00000544990 SHTN1A0MZ66 631 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 IL1R1P14778 569 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 HIBADHP31937 336 aaKnown RBP9.16□□□□□ -0.94
CPSF7-224ENST00000544990 RFX5P48382 616 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-224ENST00000544990 HIRAP54198 1017 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-224ENST00000544990 HTRA3P83110 453 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 KIF4BQ2VIQ3 1234 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 CAVIN4Q5BKX8 364 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 DACT2Q5SW24 774 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 CDC37L1Q7L3B6 337 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 TRPM4Q8TD43 1214 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 DCPSQ96C86 337 aaKnown RBP9.16□□□□□ -0.94
CPSF7-224ENST00000544990 GMLQ99445 158 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 TRPM7Q96QT4 1865 aa9.16□□□□□ -0.94
CPSF7-224ENST00000544990 IRS2Q9Y4H2 1338 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 C3orf80F5H4A9 247 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 SRGAP3O43295 1099 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 FRAT2O75474 233 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 CIAO1O76071 339 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 SASH1O94885 1247 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 IFIT1P09914 478 aaKnown RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 PUM3Q15397 648 aaKnown RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 ITPRIPQ8IWB1 547 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 DNAJC5GQ8N7S2 189 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 PROCA1Q8NCQ7 364 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 SPIRE2Q8WWL2 714 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 KLRG1Q96E93 195 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 FAM84BQ96KN1 310 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-224ENST00000544990 SIL1Q9H173 461 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 MYOZ2Q9NPC6 264 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 COPRSQ9NQ92 184 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 CEP126Q9P2H0 1117 aa9.15□□□□□ -0.94
CPSF7-224ENST00000544990 SLC5A1P13866 664 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 IL15P40933 162 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-224ENST00000544990 GYG1P46976 350 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 FKBP1AP62942 108 aaKnown RBP9.14□□□□□ -0.95
CPSF7-224ENST00000544990 MTX1Q13505 466 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 VGLL2Q8N8G2 317 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
CPSF7-224ENST00000544990 LPIN2Q92539 896 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 MXD3Q9BW11 206 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 GLIS2Q9BZE0 524 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-224ENST00000544990 RCAN3Q9UKA8 241 aa9.14□□□□□ -0.95
CPSF7-224ENST00000544990 FAM205AQ6ZU69 1335 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 ZNF646O15015 1829 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 EGFRP00533 1210 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 FGFR2P21802 821 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 SCARF1Q14162 830 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 ATG9AQ7Z3C6 839 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 KRT26Q7Z3Y9 468 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 FBXO33Q7Z6M2 555 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 USP48Q86UV5 1035 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 KIAA0825Q8IV33 1275 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 PA2G4Q9UQ80 394 aaKnown RBP9.13□□□□□ -0.95
CPSF7-224ENST00000544990 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
CPSF7-224ENST00000544990 TRAF5O00463 557 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-224ENST00000544990 CELF2O95319 508 aaKnown RBP9.12□□□□□ -0.95
CPSF7-224ENST00000544990 RLBP1P12271 317 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 USP46P62068 366 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 G3BP1Q13283 466 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPSF7-224ENST00000544990 ATP2B3Q16720 1220 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 DEFB115Q30KQ5 88 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 MFSD14BQ5SR56 506 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
CPSF7-224ENST00000544990 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 TBC1D22AQ8WUA7 517 aa9.12□□□□□ -0.95
CPSF7-224ENST00000544990 GNL3LQ9NVN8 582 aaKnown RBP9.12□□□□□ -0.95
CPSF7-224ENST00000544990 GGA3Q9NZ52 723 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms