RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ADCY9O60503 1353 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 IGSF1Q8N6C5 1336 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
CPSF7-222ENST00000544585 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
CPSF7-222ENST00000544585 TGFB2P61812 414 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 ORC1Q13415 861 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 HIF1AQ16665 826 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 NBPF6Q5VWK0 638 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 MPRIPQ6WCQ1 1025 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 Q6ZVU0 165 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 CRELD1Q96HD1 420 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 NBPF4Q96M43 638 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 DNAJC25Q9H1X3 360 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 COL24A1Q17RW2 1714 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 QRICH2Q9H0J4 1663 aa8.36□□□□□ -1.07
CPSF7-222ENST00000544585 EDC4Q6P2E9 1401 aaKnown RBP8.36□□□□□ -1.07
CPSF7-222ENST00000544585 NSD2O96028 1365 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 MAP3K19Q56UN5 1328 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 QSER1Q2KHR3 1735 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 SLC19A1P41440 591 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 RELBQ01201 579 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 GNASQ5JWF2 1037 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 SLC43A3Q8NBI5 491 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 CARD11Q9BXL7 1154 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 CFHR5Q9BXR6 569 aa8.35□□□□□ -1.07
CPSF7-222ENST00000544585 SMARCA5O60264 1052 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-222ENST00000544585 CPNE3O75131 537 aaKnown RBP8.34□□□□□ -1.07
CPSF7-222ENST00000544585 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
CPSF7-222ENST00000544585 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
CPSF7-222ENST00000544585 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
CPSF7-222ENST00000544585 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
CPSF7-222ENST00000544585 PRKAG2Q9UGJ0 569 aa8.34□□□□□ -1.07
CPSF7-222ENST00000544585 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-222ENST00000544585 PCDH11XQ9BZA7 1347 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 PCDH11YQ9BZA8 1340 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 MICAL2O94851 1124 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 ZIC2O95409 532 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-222ENST00000544585 FBLN1P23142 703 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 TXLNAP40222 546 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 FSTL1Q12841 308 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 ARHGAP27Q6ZUM4 889 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 C16orf71Q8IYS4 520 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-222ENST00000544585 ITPKCQ96DU7 683 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 SPATA32Q96LK8 384 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 NSD3Q9BZ95 1437 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 ACBD3Q9H3P7 528 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 ZNF395Q9H8N7 513 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-222ENST00000544585 PALLDQ8WX93 1383 aa8.33□□□□□ -1.08
CPSF7-222ENST00000544585 A6NHS1 94 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 ATP2B1P20020 1258 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 PLA2G4AP47712 749 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 PRELPP51888 382 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 CDAN1Q8IWY9 1227 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 BCS1LQ9Y276 419 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
CPSF7-222ENST00000544585 LOC102724428A0A0B4J2F2 783 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 TGFBR3LH3BV60 316 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 FYB1O15117 783 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 CYP27B1O15528 508 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 SIK1P57059 783 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 WDR4P57081 412 aaKnown RBP8.31□□□□□ -1.08
CPSF7-222ENST00000544585 TMF1P82094 1093 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 USHBP1Q8N6Y0 703 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 PIGBQ92521 554 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-222ENST00000544585 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
CPSF7-222ENST00000544585 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
CPSF7-222ENST00000544585 LY75O60449 1722 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 A0A0G2JLW4 131 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 OPLAHO14841 1288 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 GIPC1O14908 333 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 MMP10P09238 476 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 CTSHP09668 335 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 GPC1P35052 558 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 RRS1Q15050 365 aaKnown RBP8.3□□□□□ -1.08
CPSF7-222ENST00000544585 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
CPSF7-222ENST00000544585 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 COL13A1Q5TAT6 717 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-222ENST00000544585 DPH6Q7L8W6 267 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 INPP5FQ9Y2H2 1132 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
CPSF7-222ENST00000544585 RTL1A6NKG5 1358 aa8.3□□□□□ -1.08
CPSF7-222ENST00000544585 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
CPSF7-222ENST00000544585 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
CPSF7-222ENST00000544585 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.085e-10■■■■■ 57.2
CPSF7-222ENST00000544585 TNNI2P48788 182 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 FOXC1Q12948 553 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms