RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 GAKO14976 1311 aa17.13■□□□□ 0.33
VAMP1-208ENST00000544432 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
VAMP1-208ENST00000544432 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
VAMP1-208ENST00000544432 CACNB3P54284 484 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 INHBEP58166 350 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
VAMP1-208ENST00000544432 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
VAMP1-208ENST00000544432 IGSF3O75054 1194 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 TRPA1O75762 1119 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
VAMP1-208ENST00000544432 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 CLMNQ96JQ2 1002 aa17.11■□□□□ 0.33
VAMP1-208ENST00000544432 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-208ENST00000544432 MCAMP43121 646 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.1■□□□□ 0.33
VAMP1-208ENST00000544432 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 DBNDD2Q9BQY9 259 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 IDI2Q9BXS1 227 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
VAMP1-208ENST00000544432 HMMRO75330 724 aa17.09■□□□□ 0.33
VAMP1-208ENST00000544432 MAP4K4O95819 1239 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-208ENST00000544432 LDHCP07864 332 aa17.09■□□□□ 0.33
VAMP1-208ENST00000544432 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
VAMP1-208ENST00000544432 GPR75-ASB3A0A0A6YYF3 556 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 ENTPD3O75355 529 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 GSTO1P78417 241 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 MECOMQ03112 1051 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 MKRN3Q13064 507 aaKnown RBP17.08■□□□□ 0.32
VAMP1-208ENST00000544432 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 DCAF15Q66K64 600 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 PI16Q6UXB8 463 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-208ENST00000544432 CFHR5Q9BXR6 569 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 FAM198AQ9UFP1 575 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 AKAP11Q9UKA4 1901 aa17.08■□□□□ 0.32
VAMP1-208ENST00000544432 MROH7-TTC4A0A0A0MT08 1334 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 NFIAQ12857 509 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
VAMP1-208ENST00000544432 TBC1D9Q6ZT07 1266 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
VAMP1-208ENST00000544432 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
VAMP1-208ENST00000544432 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
VAMP1-208ENST00000544432 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
VAMP1-208ENST00000544432 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
VAMP1-208ENST00000544432 GJA5P36382 358 aa17.06■□□□□ 0.32
VAMP1-208ENST00000544432 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
VAMP1-208ENST00000544432 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
VAMP1-208ENST00000544432 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
VAMP1-208ENST00000544432 CSADQ9Y600 493 aa17.06■□□□□ 0.32
VAMP1-208ENST00000544432 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 RAB11FIP3O75154 756 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 BTDP43251 543 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 TCP10Q12799 353 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 VGLL4Q14135 290 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 CCDC8Q9H0W5 538 aaPredicted RBP17.05■□□□□ 0.32
VAMP1-208ENST00000544432 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 ZNF112Q9UJU3 913 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
VAMP1-208ENST00000544432 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
VAMP1-208ENST00000544432 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
VAMP1-208ENST00000544432 RGS3P49796 1198 aa17.04■□□□□ 0.32
VAMP1-208ENST00000544432 RHBDL3P58872 404 aa17.04■□□□□ 0.32
VAMP1-208ENST00000544432 IFNL1Q8IU54 200 aa17.04■□□□□ 0.32
VAMP1-208ENST00000544432 OPTNQ96CV9 577 aa17.04■□□□□ 0.32
VAMP1-208ENST00000544432 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
VAMP1-208ENST00000544432 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
VAMP1-208ENST00000544432 CASP8AP2Q9UKL3 1982 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 SPDYE5A6NIY4 337 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 OTUD7BQ6GQQ9 843 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
VAMP1-208ENST00000544432 MIGA2Q7L4E1 593 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 AACSQ86V21 672 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 ERO1BQ86YB8 467 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 SNCAIPQ9Y6H5 919 aa17.03■□□□□ 0.32
VAMP1-208ENST00000544432 TBC1D8O95759 1140 aa17.02■□□□□ 0.32
VAMP1-208ENST00000544432 ZAP70P43403 619 aa17.02■□□□□ 0.32
VAMP1-208ENST00000544432 GTF2A2P52657 109 aa17.02■□□□□ 0.32
VAMP1-208ENST00000544432 PPP4CP60510 307 aa17.02■□□□□ 0.32
VAMP1-208ENST00000544432 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
VAMP1-208ENST00000544432 LAMB1P07942 1786 aa17.02■□□□□ 0.31
VAMP1-208ENST00000544432 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms