RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 PFKFB1P16118 471 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 SLC39A14Q15043 492 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 CCDC70Q6NSX1 233 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 KANK3Q6NY19 840 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 KSR2Q6VAB6 950 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 REM2Q8IYK8 340 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 SECISBP2LQ93073 1101 aaKnown RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 EAF2Q96CJ1 260 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 NAPGQ99747 312 aaPredicted RBP5.7□□□□□ -1.5
LMO3-229ENST00000543721 SIL1Q9H173 461 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 CXorf56Q9H5V9 222 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 ANKZF1Q9H8Y5 726 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 CARMIL3Q8ND23 1372 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 DIP2AQ14689 1571 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 USP6P35125 1406 aa5.7□□□□□ -1.5
LMO3-229ENST00000543721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 FILIP1LQ4L180 1135 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 B4GALNT4Q76KP1 1039 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 LINS1Q8NG48 757 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 ENOX1Q8TC92 643 aaKnown RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 CTAGE1Q96RT6 745 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 EYA1Q99502 592 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 FAM204AQ9H8W3 233 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 AKAP2Q9Y2D5 859 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 SLIT1O75093 1534 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 UTYO14607 1347 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 SH3TC1Q8TE82 1336 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 SOX12O15370 315 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CYP21A2P08686 494 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 MNAT1P51948 309 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CKAP4Q07065 602 aaKnown RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 IQCEQ6IPM2 695 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 MICALCLQ6ZW33 695 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 GPATCH11Q8N954 259 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CEP120Q8N960 986 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 TC2NQ8N9U0 490 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 RUBCNQ92622 972 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 TOMM22Q9NS69 142 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 RAI14Q9P0K7 980 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 IQSEC3Q9UPP2 1182 aaPredicted RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 ANKARQ7Z5J8 1434 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 PEAK1Q9H792 1746 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 TARSL2A2RTX5 802 aaKnown RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 DTNBO60941 627 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 SASH1O94885 1247 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CTDNEP1O95476 244 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 ATP1A3P13637 1013 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 PDIA3P30101 505 aaKnown RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 CPLX2Q6PUV4 134 aaKnown RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 CNGA4Q8IV77 575 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 IL17REQ8NFR9 667 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 FAM76AQ8TAV0 307 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CRACR2AQ9BSW2 395 aa5.69□□□□□ -1.5
LMO3-229ENST00000543721 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
LMO3-229ENST00000543721 TMCO5BA8MYB1 307 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 GRM8O00222 908 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 SHOX2O60902 331 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 RNF40O75150 1001 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 CDKL5O76039 1030 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 EIF2S2P20042 333 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 EIF4A1P60842 406 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 ZNF589Q86UQ0 364 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 TMTC1Q8IUR5 882 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 BANK1Q8NDB2 785 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 DPF2Q92785 391 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 RNF25Q96BH1 459 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 FTOQ9C0B1 505 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMO3-229ENST00000543721 HSD3B7Q9H2F3 369 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 EPC1Q9H2F5 836 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 FANCLQ9NW38 375 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 HPSEQ9Y251 543 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 ADGRG1Q9Y653 693 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 MED1Q15648 1581 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 ACEP12821 1306 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 A0A087WWV3 80 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 CPLX1O14810 134 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 SEMA3EO15041 775 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 FANCGO15287 622 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 RDXP35241 583 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 PIP4K2AP48426 406 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 PPFIA1Q13136 1202 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 TRIM14Q14142 442 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 ZNF569Q5MCW4 686 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 RASGRP2Q7LDG7 609 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 DNAJC5Q9H3Z4 198 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 BICC1Q9H694 974 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 PUF60Q9UHX1 559 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 CLIC4Q9Y696 253 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 MRC1P22897 1456 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 NEDD4P46934 1319 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 WDR19Q8NEZ3 1342 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 OPA1O60313 960 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 KIAA0754O94854 1291 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 INPP5BP32019 993 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 ARHGAP25P42331 645 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 STIM1Q13586 685 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 KARSQ15046 597 aaKnown RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 TOGARAM2Q6ZUX3 1019 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms