RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
TMED3-204ENST00000543455 GAKO14976 1311 aa22.96■■□□□ 1.27
TMED3-204ENST00000543455 MCAMP43121 646 aa22.95■■□□□ 1.26
TMED3-204ENST00000543455 TNNI3KQ59H18 835 aa22.95■■□□□ 1.26
TMED3-204ENST00000543455 ANKRD13AQ8IZ07 590 aa22.95■■□□□ 1.26
TMED3-204ENST00000543455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.95■■□□□ 1.267e-11■■■■■ 36.1
TMED3-204ENST00000543455 TMOD2Q9NZR1 351 aa22.95■■□□□ 1.26
TMED3-204ENST00000543455 FPGT-TNNI3KV9GXZ4 949 aa22.95■■□□□ 1.26
TMED3-204ENST00000543455 ZGPATQ8N5A5 531 aaKnown RBP22.94■■□□□ 1.26
TMED3-204ENST00000543455 DBNDD2Q9BQY9 259 aa22.94■■□□□ 1.26
TMED3-204ENST00000543455 FAM198AQ9UFP1 575 aa22.94■■□□□ 1.26
TMED3-204ENST00000543455 ABCF2Q9UG63 623 aa22.94■■□□□ 1.26
TMED3-204ENST00000543455 RFX7Q2KHR2 1363 aa22.94■■□□□ 1.26
TMED3-204ENST00000543455 ZBTB48P10074 688 aaPredicted RBP22.93■■□□□ 1.26
TMED3-204ENST00000543455 SPATA5Q8NB90 893 aa22.93■■□□□ 1.26
TMED3-204ENST00000543455 COG6Q9Y2V7 657 aa22.93■■□□□ 1.26
TMED3-204ENST00000543455 MYO5AQ9Y4I1 1855 aaKnown RBP22.93■■□□□ 1.26
TMED3-204ENST00000543455 SREBF2Q12772 1141 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 TBC1D9Q6ZT07 1266 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 FAM151AQ8WW52 585 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 CNKSR2Q8WXI2 1034 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 FAM163AQ96GL9 167 aaPredicted RBP22.92■■□□□ 1.26
TMED3-204ENST00000543455 ABHD8Q96I13 439 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 R3HDMLQ9H3Y0 253 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 ELP3Q9H9T3 547 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 USP40Q9NVE5 1235 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 AK9Q5TCS8 1911 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 TBC1D8O95759 1140 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
TMED3-204ENST00000543455 VGLL4Q14135 290 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 GORABQ5T7V8 394 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 ZFPM1Q8IX07 1006 aa22.92■■□□□ 1.26
TMED3-204ENST00000543455 MECOMQ03112 1051 aa22.91■■□□□ 1.26
TMED3-204ENST00000543455 TCP10Q12799 353 aa22.91■■□□□ 1.26
TMED3-204ENST00000543455 DZIP1Q86YF9 867 aaKnown RBP22.91■■□□□ 1.26
TMED3-204ENST00000543455 MCOLN1Q9GZU1 580 aa22.91■■□□□ 1.26
TMED3-204ENST00000543455 ZBTB40Q9NUA8 1239 aa22.91■■□□□ 1.26
TMED3-204ENST00000543455 TLR7Q9NYK1 1049 aaKnown RBP22.91■■□□□ 1.26
TMED3-204ENST00000543455 MROH7-TTC4A0A0A0MT08 1334 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 MANSC4A6NHS7 340 aaPredicted RBP22.9■■□□□ 1.26
TMED3-204ENST00000543455 IGF2BP3O00425 579 aaKnown RBP eCLIP22.9■■□□□ 1.26
TMED3-204ENST00000543455 MS4A1P11836 297 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 MAP3K9P80192 1104 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 C20orf194Q5TEA3 1177 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 EAF2Q96CJ1 260 aaPredicted RBP22.9■■□□□ 1.26
TMED3-204ENST00000543455 OPTNQ96CV9 577 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 CFHR5Q9BXR6 569 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 DBNLQ9UJU6 430 aaKnown RBP22.9■■□□□ 1.26
TMED3-204ENST00000543455 SNCAIPQ9Y6H5 919 aa22.9■■□□□ 1.26
TMED3-204ENST00000543455 UQCRFS1P1P0C7P4 283 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.25
TMED3-204ENST00000543455 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 IFNL1Q8IU54 200 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 SIRT2Q8IXJ6 389 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 NSUN4Q96CB9 384 aaKnown RBP22.89■■□□□ 1.25
TMED3-204ENST00000543455 EXOC6BQ9Y2D4 811 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 DOCK2Q92608 1830 aa22.89■■□□□ 1.25
TMED3-204ENST00000543455 ATRNL1Q5VV63 1379 aa22.88■■□□□ 1.25
TMED3-204ENST00000543455 WDHD1O75717 1129 aaPredicted RBP22.88■■□□□ 1.25
TMED3-204ENST00000543455 MS4A4AQ96JQ5 239 aa22.88■■□□□ 1.25
TMED3-204ENST00000543455 IDI2Q9BXS1 227 aa22.88■■□□□ 1.25
TMED3-204ENST00000543455 DDX4Q9NQI0 724 aaKnown RBP22.88■■□□□ 1.25
TMED3-204ENST00000543455 SNRKQ9NRH2 765 aa22.88■■□□□ 1.25
TMED3-204ENST00000543455 MAST2Q6P0Q8 1798 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 BTDP43251 543 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 RGS3P49796 1198 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 RHBDL3P58872 404 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 MIGA2Q7L4E1 593 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 SH3BP5LQ7L8J4 393 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 ZKSCAN4Q969J2 545 aaPredicted RBP22.87■■□□□ 1.25
TMED3-204ENST00000543455 WRNIP1Q96S55 665 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 PTPN18Q99952 460 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 DDX19BQ9UMR2 479 aa22.87■■□□□ 1.25
TMED3-204ENST00000543455 GPR75-ASB3A0A0A6YYF3 556 aa22.86■■□□□ 1.25
TMED3-204ENST00000543455 TESPA1A2RU30 521 aaPredicted RBP22.86■■□□□ 1.25
TMED3-204ENST00000543455 DGKZQ13574 1117 aa22.86■■□□□ 1.25
TMED3-204ENST00000543455 CCDC8Q9H0W5 538 aaPredicted RBP22.86■■□□□ 1.25
TMED3-204ENST00000543455 CYP2E1P05181 493 aaPredicted RBP22.85■■□□□ 1.25
TMED3-204ENST00000543455 INHBEP58166 350 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 TTC39AQ5SRH9 613 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 ZNF296Q8WUU4 475 aaPredicted RBP22.85■■□□□ 1.25
TMED3-204ENST00000543455 ZNF512BQ96KM6 892 aaPredicted RBP22.85■■□□□ 1.25
TMED3-204ENST00000543455 ZNF112Q9UJU3 913 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 GPR25O00155 361 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 INPP5BP32019 993 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 NOM1Q5C9Z4 860 aaKnown RBP22.85■■□□□ 1.25
TMED3-204ENST00000543455 DCAF15Q66K64 600 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 SLF2Q8IX21 1173 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 ZNF341Q9BYN7 854 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 CSADQ9Y600 493 aa22.85■■□□□ 1.25
TMED3-204ENST00000543455 SPDYE5A6NIY4 337 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 ENTPD3O75355 529 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 SLURP2P0DP57 97 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 CCDC158Q5M9N0 1113 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 BRI3BPQ8WY22 251 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 HOOK2Q96ED9 719 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 OTUD5Q96G74 571 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 RAI14Q9P0K7 980 aa22.84■■□□□ 1.25
TMED3-204ENST00000543455 CDK5RAP2Q96SN8 1893 aa22.83■■□□□ 1.25
TMED3-204ENST00000543455 ZAP70P43403 619 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms