RNA–Protein interactions for RNA: ENST00000543237.5

GPHN-204, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-204ENST00000543237 CACTIN-AS1Q8N1I8 211 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 KCNB2Q92953 911 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 SMARCE1Q969G3 411 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 FHOD1Q9Y613 1164 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 TAF1LQ8IZX4 1826 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 TUBGCP6Q96RT7 1819 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 C4BP0C0L5 1744 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 H2AFXP16104 143 aaPredicted RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 SFSWAPQ12872 951 aaKnown RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 ALDH1L2Q3SY69 923 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 WDR78Q5VTH9 848 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 FBXO38Q6PIJ6 1188 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 COL23A1Q86Y22 540 aaPredicted RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 NBPF15Q8N660 670 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 PLEKHF1Q96S99 279 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 THUMPD2Q9BTF0 503 aaKnown RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 POLR3CQ9BUI4 534 aaPredicted RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 UBXN6Q9BZV1 441 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 ARGLU1Q9NWB6 273 aaPredicted RBP6.45□□□□□ -1.38
GPHN-204ENST00000543237 MCM8Q9UJA3 840 aa6.45□□□□□ -1.38
GPHN-204ENST00000543237 GNPATO15228 680 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 RTN2O75298 545 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 PNMA6AP0CW24 399 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 PLA2G4AP47712 749 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 PDAP1Q13442 181 aaKnown RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 MSL1Q68DK7 614 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 TAX1BP1Q86VP1 789 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 SAMD3Q8N6K7 520 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 SMCR8Q8TEV9 937 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 GCC1Q96CN9 775 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 SYT17Q9BSW7 474 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 TRIM7Q9C029 511 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 TTC12Q9H892 705 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 ST7Q9NRC1 585 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 LMBRD1Q9NUN5 540 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 USP25Q9UHP3 1055 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 TESPA1A2RU30 521 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 HNRNPH1P31943 449 aaKnown RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 FXR2P51116 673 aaKnown RBP eCLIP6.44□□□□□ -1.38
GPHN-204ENST00000543237 FOXD4Q12950 439 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 DBN1Q16643 649 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 GORABQ5T7V8 394 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 ANKRD45Q5TZF3 282 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 ZNF467Q7Z7K2 595 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 SDCCAG8Q86SQ7 713 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 MICALL1Q8N3F8 863 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 PIP4P2Q8N4L2 257 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 EFCAB3Q8N7B9 438 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 TEKT1Q969V4 418 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
GPHN-204ENST00000543237 KDM6AO15550 1401 aaPredicted RBP6.44□□□□□ -1.38
GPHN-204ENST00000543237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 ZSCAN9O15535 394 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 PTCD1O75127 700 aaKnown RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 CD2BP2O95400 341 aaKnown RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 FAM200BP0CF97 657 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 CCNHP51946 323 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 CCDC15Q0P6D6 951 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 TSNAXIP1Q2TAA8 658 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 ACBD5Q5T8D3 534 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 TRIM42Q8IWZ5 723 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 LINC00116Q8NCU8 138 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 GAS2L2Q8NHY3 880 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 MIPOL1Q8TD10 442 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 BICD1Q96G01 975 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 RTCBQ9Y3I0 505 aaKnown RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 HMGB1P1B2RPK0 211 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 KIF5CO60282 957 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 NBPF7P0C2Y1 421 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 IFT88Q13099 833 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 ITPK1Q13572 414 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 MTHFSDQ2M296 383 aaKnown RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 N4BP2L2Q92802 583 aaPredicted RBP6.43□□□□□ -1.38
GPHN-204ENST00000543237 GTF3C6Q969F1 213 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 PHF12Q96QT6 1004 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 TRPC6Q9Y210 931 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 SCN11AQ9UI33 1791 aa6.43□□□□□ -1.38
GPHN-204ENST00000543237 H7C1W4 665 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
GPHN-204ENST00000543237 CDC45O75419 566 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 AP1G2O75843 785 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 ERLIN2O94905 339 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 VCAM1P19320 739 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 GPTP24298 496 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 YY1P25490 414 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 ST5P78524 1137 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 TEFQ10587 303 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 GPR162Q16538 588 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 TRAPPC3LQ5T215 181 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 C16orf87Q6PH81 154 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 LRRC31Q6UY01 552 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 IQCF2Q8IXL9 164 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 TTC5Q8N0Z6 440 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 SRRTQ9BXP5 876 aaKnown RBP6.42□□□□□ -1.38
GPHN-204ENST00000543237 SLC52A2Q9HAB3 445 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 TMOD4Q9NZQ9 345 aa6.42□□□□□ -1.38
GPHN-204ENST00000543237 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.42□□□□□ -1.38
GPHN-204ENST00000543237 COL3A1P02461 1466 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms