RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 PCDHA7Q9UN72 937 aa15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 TIAM2Q8IVF5 1701 aa15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 GYG1P46976 350 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 C11orf57Q6ZUT1 292 aaPredicted RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 RANBP6O60518 1105 aaKnown RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 KIF23Q02241 960 aaPredicted RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 ALX1Q15699 326 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 KCNF1Q9H3M0 494 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 RTEL1Q9NZ71 1219 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 ZSWIM5Q9P217 1185 aa15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
SLC3A2-220ENST00000542922 TMEM67Q5HYA8 995 aa15.96■□□□□ 0.15
SLC3A2-220ENST00000542922 MYSM1Q5VVJ2 828 aa15.96■□□□□ 0.15
SLC3A2-220ENST00000542922 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
SLC3A2-220ENST00000542922 ZKSCAN3Q9BRR0 538 aa15.96■□□□□ 0.15
SLC3A2-220ENST00000542922 SLC4A4Q9Y6R1 1079 aa15.96■□□□□ 0.15
SLC3A2-220ENST00000542922 A0A1B0GVL5 298 aa15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 RRP12Q5JTH9 1297 aaKnown RBP15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 CCDC24Q8N4L8 307 aa15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF165P49910 485 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 FAM160A1Q05DH4 1040 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 TBC1D9BQ66K14 1250 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 ATL3Q6DD88 541 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 NFXL1Q6ZNB6 911 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 CHMP4CQ96CF2 233 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 ALG1Q9BT22 464 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 LRP2BPQ9P2M1 347 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF652Q9Y2D9 606 aa15.95■□□□□ 0.14
SLC3A2-220ENST00000542922 ZBTB43O43298 467 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 KLRK1P26718 216 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 TDO2P48775 406 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 STK38Q15208 465 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 NTRK3Q16288 839 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 SDR42E1Q8WUS8 393 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 C8orf37Q96NL8 207 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 ABCF2Q9UG63 623 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 SRP68Q9UHB9 627 aaKnown RBP15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 CACNA1SQ13698 1873 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 GOLGA8AA7E2F4 631 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 NDUFA8P51970 172 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 FMR1NBQ8N0W7 255 aaPredicted RBP15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 FBXW7Q969H0 707 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
SLC3A2-220ENST00000542922 BAZ2AQ9UIF9 1905 aaKnown RBP15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 KINO60870 393 aaKnown RBP15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 CYP7A1P22680 504 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 ANKRD18AQ8IVF6 992 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 MRPS27Q92552 414 aaKnown RBP15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 TOMM22Q9NS69 142 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 PYCARDQ9ULZ3 195 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF804BA4D1E1 1349 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 PNPLA7Q6ZV29 1317 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 KRT40Q6A162 431 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 SLC51AQ86UW1 340 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 SGMS1Q86VZ5 419 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 POLR3EQ9NVU0 708 aa15.93■□□□□ 0.14
SLC3A2-220ENST00000542922 MROH7-TTC4A0A0A0MT08 1334 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 PTGS1P23219 599 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 IQCB1Q15051 598 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 ADALQ6DHV7 355 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 VPS37DQ86XT2 251 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 SPTLC2O15270 562 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 GUCY1A2P33402 732 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 SF3A1Q15459 793 aaKnown RBP15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 ANO1Q5XXA6 986 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 MFSD6Q6ZSS7 791 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 CMTR1Q8N1G2 835 aaKnown RBP15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF384Q8TF68 577 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 RAI14Q9P0K7 980 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 MINPP1Q9UNW1 487 aa15.92■□□□□ 0.14
SLC3A2-220ENST00000542922 BTAF1O14981 1849 aa15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 YEATS4O95619 227 aa15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 MARCKSP29966 332 aaPredicted RBP15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 ZNF75DP51815 510 aa15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 DYNLL1P63167 89 aaKnown RBP15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
SLC3A2-220ENST00000542922 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms