RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	RAB11FIP3	O75154	756 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	MECOM	Q03112	1051 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	PRKG1	Q13976	671 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	TBC1D9	Q6ZT07	1266 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	ERICH6	Q7L0X2	663 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	DZIP1	Q86YF9	867 aa	Known RBP	18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	KIF1BP	Q96EK5	621 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	TMOD2	Q9NZR1	351 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	ANGEL1	Q9UNK9	670 aa	Known RBP	18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	FZD1	Q9UP38	647 aa		18.96	■□□□□ 0.63
ECHDC2-223	ENST00000542552	USP2	O75604	605 aa	Predicted RBP	18.95	■□□□□ 0.62
ECHDC2-223	ENST00000542552	SLF2	Q8IX21	1173 aa		18.95	■□□□□ 0.62
ECHDC2-223	ENST00000542552	AIDA	Q96BJ3	306 aa		18.95	■□□□□ 0.62
ECHDC2-223	ENST00000542552	NSUN4	Q96CB9	384 aa	Known RBP	18.95	■□□□□ 0.62
ECHDC2-223	ENST00000542552	RPAP1	Q9BWH6	1393 aa	Predicted RBP	18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CYP2E1	P05181	493 aa	Predicted RBP	18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	KIF23	Q02241	960 aa	Predicted RBP	18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	AACS	Q86V21	672 aa		18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	IL1RAPL2	Q9NP60	686 aa		18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	SNRK	Q9NRH2	765 aa		18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	USP40	Q9NVE5	1235 aa		18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	MROH7-TTC4	A0A0A0MT08	1334 aa		18.94	■□□□□ 0.62
ECHDC2-223	ENST00000542552	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	GPR75-ASB3	A0A0A6YYF3	556 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CTCF	P49711	727 aa	Predicted RBP	18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	NFIA	Q12857	509 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	FAM151A	Q8WW52	585 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	FAM198A	Q9UFP1	575 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	OTOF	Q9HC10	1997 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	RFX7	Q2KHR2	1363 aa		18.93	■□□□□ 0.62
ECHDC2-223	ENST00000542552	IGSF3	O75054	1194 aa		18.92	■□□□□ 0.62
ECHDC2-223	ENST00000542552	ZAP70	P43403	619 aa		18.92	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CLASRP	Q8N2M8	674 aa	Known RBP	18.92	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CSRNP1	Q96S65	589 aa		18.92	■□□□□ 0.62
ECHDC2-223	ENST00000542552	IDI2	Q9BXS1	227 aa		18.92	■□□□□ 0.62
ECHDC2-223	ENST00000542552	LAMB1	P07942	1786 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	MAST2	Q6P0Q8	1798 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	APBB1	O00213	710 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CA12	O43570	354 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	HSPA8	P11142	646 aa	Known RBP	18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	IREB2	P48200	963 aa	Known RBP	18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	GSTO1	P78417	241 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	REM2	Q8IYK8	340 aa	Predicted RBP	18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	CLMN	Q96JQ2	1002 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	BEGAIN	Q9BUH8	593 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	RAI14	Q9P0K7	980 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	LRP2BP	Q9P2M1	347 aa		18.91	■□□□□ 0.62
ECHDC2-223	ENST00000542552	LDHC	P07864	332 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	BTD	P43251	543 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	RHBDL3	P58872	404 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	SLC10A4	Q96EP9	437 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	DCTPP1	Q9H773	170 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	PIH1D3	Q9NQM4	214 aa	Known RBP	18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	PRDM10	Q9NQV6	1147 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	PCDHB15	Q9Y5E8	787 aa		18.9	■□□□□ 0.62
ECHDC2-223	ENST00000542552	WDHD1	O75717	1129 aa	Predicted RBP	18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	MAP4K4	O95819	1239 aa	Predicted RBP	18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	SPRYD7	Q5W111	196 aa		18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ZFPM1	Q8IX07	1006 aa		18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ANKRD13A	Q8IZ07	590 aa		18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	HOOK2	Q96ED9	719 aa		18.89	■□□□□ 0.61
ECHDC2-223	ENST00000542552	DOCK2	Q92608	1830 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ENTPD3	O75355	529 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	RGS3	P49796	1198 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	LBX1	P52954	281 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	TCP10	Q12799	353 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	CRBN	Q96SW2	442 aa		18.88	■□□□□ 0.61
ECHDC2-223	ENST00000542552	NPM3	O75607	178 aa	Known RBP	18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	IFIT2	P09913	472 aa	Known RBP	18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ZBTB48	P10074	688 aa	Predicted RBP	18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	TM4SF4	P48230	202 aa		18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	WNK4	Q96J92	1243 aa		18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	LRRCC1	Q9C099	1032 aa		18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	DDX4	Q9NQI0	724 aa	Known RBP	18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	SAGE1	Q9NXZ1	904 aa		18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	NDUFB9	Q9Y6M9	179 aa		18.87	■□□□□ 0.61
ECHDC2-223	ENST00000542552	AK9	Q5TCS8	1911 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ATRNL1	Q5VV63	1379 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	PPP4C	P60510	307 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	MAP3K9	P80192	1104 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	DCAF15	Q66K64	600 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	NAA16	Q6N069	864 aa	Predicted RBP	18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	SH3BP5L	Q7L8J4	393 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ANTXR1	Q9H6X2	564 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	RNF186	Q9NXI6	227 aa		18.86	■□□□□ 0.61
ECHDC2-223	ENST00000542552	GJA5	P36382	358 aa		18.85	■□□□□ 0.61
ECHDC2-223	ENST00000542552	VGLL4	Q14135	290 aa		18.85	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ADGRA1	Q86SQ6	560 aa		18.85	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ZNF112	Q9UJU3	913 aa		18.85	■□□□□ 0.61
ECHDC2-223	ENST00000542552	SMARCA5	O60264	1052 aa	Predicted RBP	18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	MAP3K10	Q02779	954 aa		18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	MKRN3	Q13064	507 aa	Known RBP	18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	IFFO2	Q5TF58	517 aa		18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	TMED8	Q6PL24	325 aa	Predicted RBP	18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	MIGA2	Q7L4E1	593 aa		18.84	■□□□□ 0.61
ECHDC2-223	ENST00000542552	ZNF341	Q9BYN7	854 aa		18.84	■□□□□ 0.61

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