RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 SIPA1L1O43166 1804 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 HMMRO75330 724 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 CYP2E1P05181 493 aaPredicted RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 NF2P35240 595 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 ZAP70P43403 619 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 TTLL12Q14166 644 aaPredicted RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
C2CD3-217ENST00000542452 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 PIH1D3Q9NQM4 214 aaKnown RBP14.15□□□□□ -0.14
C2CD3-217ENST00000542452 AK9Q5TCS8 1911 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 MAP2K2P36507 400 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 NOGQ13253 232 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 KIF1BPQ96EK5 621 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 CLMNQ96JQ2 1002 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 FAM198AQ9UFP1 575 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 PCDHB15Q9Y5E8 787 aa14.14□□□□□ -0.15
C2CD3-217ENST00000542452 ATRNL1Q5VV63 1379 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 USP2O75604 605 aaPredicted RBP14.13□□□□□ -0.15
C2CD3-217ENST00000542452 HSPA8P11142 646 aaKnown RBP14.13□□□□□ -0.15
C2CD3-217ENST00000542452 BTDP43251 543 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 RHBDL3P58872 404 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 KIF23Q02241 960 aaPredicted RBP14.13□□□□□ -0.15
C2CD3-217ENST00000542452 HSP90AB4PQ58FF6 505 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 FKBP1CQ5VVH2 108 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 ARMC9Q7Z3E5 817 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 ADGRA1Q86SQ6 560 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 FAM83AQ86UY5 434 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 ZFPM1Q8IX07 1006 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
C2CD3-217ENST00000542452 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
C2CD3-217ENST00000542452 TMOD2Q9NZR1 351 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 TSKSQ9UJT2 592 aa14.13□□□□□ -0.15
C2CD3-217ENST00000542452 MYH7P12883 1935 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 SMARCA5O60264 1052 aaPredicted RBP14.12□□□□□ -0.15
C2CD3-217ENST00000542452 TNNI2P48788 182 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 MAP2K1Q02750 393 aaPredicted RBP14.12□□□□□ -0.15
C2CD3-217ENST00000542452 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
C2CD3-217ENST00000542452 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
C2CD3-217ENST00000542452 CCDC102AQ96A19 550 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 ANTXR1Q9H6X2 564 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 USP40Q9NVE5 1235 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 RAI14Q9P0K7 980 aa14.12□□□□□ -0.15
C2CD3-217ENST00000542452 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
C2CD3-217ENST00000542452 GPR75-ASB3A0A0A6YYF3 556 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 RAB11FIP3O75154 756 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 WDHD1O75717 1129 aaPredicted RBP14.11□□□□□ -0.15
C2CD3-217ENST00000542452 GJA5P36382 358 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 TCP10Q12799 353 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 SUPT20HL1Q3ZLR7 823 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 COL13A1Q5TAT6 717 aaPredicted RBP14.11□□□□□ -0.15
C2CD3-217ENST00000542452 SH3BP5LQ7L8J4 393 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 FAM151AQ8WW52 585 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
C2CD3-217ENST00000542452 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
C2CD3-217ENST00000542452 SLURP2P0DP57 97 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 RGS3P49796 1198 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.1□□□□□ -0.15
C2CD3-217ENST00000542452 CLASRPQ8N2M8 674 aaKnown RBP14.1□□□□□ -0.15
C2CD3-217ENST00000542452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.1□□□□□ -0.15
C2CD3-217ENST00000542452 AIDAQ96BJ3 306 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 CSRNP1Q96S65 589 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 DCTPP1Q9H773 170 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 DOCK1Q14185 1865 aa14.1□□□□□ -0.15
C2CD3-217ENST00000542452 IREB2P48200 963 aaKnown RBP14.09□□□□□ -0.15
C2CD3-217ENST00000542452 CTCFP49711 727 aaPredicted RBP14.09□□□□□ -0.15
C2CD3-217ENST00000542452 LBX1P52954 281 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 BCL11AQ9H165 835 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
C2CD3-217ENST00000542452 LRP2BPQ9P2M1 347 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 NAV1Q8NEY1 1877 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
C2CD3-217ENST00000542452 PHIPQ8WWQ0 1821 aa14.08□□□□□ -0.15
C2CD3-217ENST00000542452 ATAD5Q96QE3 1844 aa14.08□□□□□ -0.15
C2CD3-217ENST00000542452 COL2A1P02458 1487 aaPredicted RBP14.08□□□□□ -0.16
C2CD3-217ENST00000542452 DDTLA6NHG4 134 aaPredicted RBP14.08□□□□□ -0.16
C2CD3-217ENST00000542452 PICALMQ13492 652 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 VGLL4Q14135 290 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.16
C2CD3-217ENST00000542452 LRRCC1Q9C099 1032 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 ELP3Q9H9T3 547 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 SNCAIPQ9Y6H5 919 aa14.08□□□□□ -0.16
C2CD3-217ENST00000542452 ENTPD3O75355 529 aa14.07□□□□□ -0.16
C2CD3-217ENST00000542452 IFIT2P09913 472 aaKnown RBP14.07□□□□□ -0.16
C2CD3-217ENST00000542452 GSTO1P78417 241 aa14.07□□□□□ -0.16
C2CD3-217ENST00000542452 NAA16Q6N069 864 aaPredicted RBP14.07□□□□□ -0.16
C2CD3-217ENST00000542452 MIGA2Q7L4E1 593 aa14.07□□□□□ -0.16
C2CD3-217ENST00000542452 ANKRD13AQ8IZ07 590 aa14.07□□□□□ -0.16
C2CD3-217ENST00000542452 SH3RF3Q8TEJ3 882 aaPredicted RBP14.07□□□□□ -0.16
C2CD3-217ENST00000542452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.07□□□□□ -0.16
C2CD3-217ENST00000542452 RNF186Q9NXI6 227 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms