RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 MGAMO43451 1857 aa10.86□□□□□ -0.67
CLSTN3-212ENST00000541770 DLL1O00548 723 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 IRF6O14896 467 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 GNRH1P01148 92 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 PSMC4P43686 418 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 PRMT2P55345 433 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 SNAPC2Q13487 334 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 EPHA10Q5JZY3 1008 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 SLC17A8Q8NDX2 589 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 USP44Q9H0E7 712 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 BRCA2P51587 3418 aa10.85□□□□□ -0.67
CLSTN3-212ENST00000541770 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 NBPF7P0C2Y1 421 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 HOXD10P28358 340 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 GRK4P32298 578 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 UBE4AQ14139 1066 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 GRIK5Q16478 980 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 MIGA2Q7L4E1 593 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 TEKT1Q969V4 418 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 HTATIP2Q9BUP3 242 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 TNNQ9UQP3 1299 aa10.84□□□□□ -0.67
CLSTN3-212ENST00000541770 RLBP1P12271 317 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 CCL5P13501 91 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 OSBPP22059 807 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 CTGFP29279 349 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 UBXN2AP68543 259 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 PPIL2Q13356 520 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 PDE3AQ14432 1141 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 DCAF15Q66K64 600 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 TMEM57Q8N5G2 664 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 HOOK2Q96ED9 719 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 PUS3Q9BZE2 481 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 HDAC5Q9UQL6 1122 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 RIPOR2Q9Y4F9 1068 aa10.83□□□□□ -0.68
CLSTN3-212ENST00000541770 PDHXO00330 501 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 GNAI3P08754 354 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 CAVIN4Q5BKX8 364 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 C17orf99Q6UX52 265 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 KAZALD1Q96I82 304 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 ZNF341Q9BYN7 854 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 NR2E3Q9Y5X4 410 aa10.82□□□□□ -0.68
CLSTN3-212ENST00000541770 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 UBTFL1P0CB47 393 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 INPP5BP32019 993 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 GJA8P48165 433 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 RRP1P56182 461 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 PPATQ06203 517 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 RABL6Q3YEC7 729 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 TBC1D22AQ8WUA7 517 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 MEIS3Q99687 375 aa10.81□□□□□ -0.68
CLSTN3-212ENST00000541770 GJB1P08034 283 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 FCGRTP55899 365 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 PRKCZQ05513 592 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 TCP10Q12799 353 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 MVPQ14764 893 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 METTL24Q5JXM2 366 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 ANKRD23Q86SG2 305 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 FAM83AQ86UY5 434 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 ITPRIPQ8IWB1 547 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 U2AF1L4Q8WU68 220 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
CLSTN3-212ENST00000541770 ZBTB7BO15156 539 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 EVI5O60447 810 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 FBXO33Q7Z6M2 555 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 ZDHHC15Q96MV8 337 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 CHMP4BQ9H444 224 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 BICC1Q9H694 974 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 DDX19BQ9UMR2 479 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 GABRQQ9UN88 632 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 MAST3O60307 1309 aa10.79□□□□□ -0.68
CLSTN3-212ENST00000541770 TFRCP02786 760 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 GNAI2P04899 355 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 CYP2C8P10632 490 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 BCAMP50895 628 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 LRRC24Q50LG9 513 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 COG6Q9Y2V7 657 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 DOCK2Q92608 1830 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 TRIOBPQ9H2D6 2365 aa10.78□□□□□ -0.68
CLSTN3-212ENST00000541770 ALPK3Q96L96 1907 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms