RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 SMTNL1A8MU46 457 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 CTAGE5O15320 804 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 F13A1P00488 732 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 KRT85P78386 507 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 SF3B3Q15393 1217 aaKnown RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 VPS53Q5VIR6 699 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
CHFR-219ENST00000541341 ANKIB1Q9P2G1 1089 aa12.22□□□□□ -0.45
CHFR-219ENST00000541341 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 PKP1Q13835 747 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 GCKRQ14397 625 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 CWF19L2Q2TBE0 894 aaKnown RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 KIF4BQ2VIQ3 1234 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 SLC4A10Q6U841 1118 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 KIF1BPQ96EK5 621 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 EYA3Q99504 573 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 ALDH8A1Q9H2A2 487 aaPredicted RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 GBA2Q9HCG7 927 aaPredicted RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
CHFR-219ENST00000541341 GGA3Q9NZ52 723 aa12.21□□□□□ -0.45
CHFR-219ENST00000541341 A0A1B0GUL6 1792 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 H7C1W4 665 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 TRPA1O75762 1119 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 PCCAP05165 728 aaPredicted RBP12.2□□□□□ -0.46
CHFR-219ENST00000541341 CDC25BP30305 580 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 ZNF157P51786 506 aaPredicted RBP12.2□□□□□ -0.46
CHFR-219ENST00000541341 CASP7P55210 303 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
CHFR-219ENST00000541341 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 RGMBQ6NW40 437 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 FBXW7Q969H0 707 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 MEIS3Q99687 375 aa12.2□□□□□ -0.46
CHFR-219ENST00000541341 FAM155AB1AL88 458 aaPredicted RBP12.19□□□□□ -0.46
CHFR-219ENST00000541341 CCP110O43303 1012 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 GLRX3O76003 335 aaKnown RBP12.19□□□□□ -0.46
CHFR-219ENST00000541341 ANGEL2Q5VTE6 544 aaKnown RBP12.19□□□□□ -0.46
CHFR-219ENST00000541341 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 MOB2Q70IA6 237 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
CHFR-219ENST00000541341 DPF2Q92785 391 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 CDCA5Q96FF9 252 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 MXD3Q9BW11 206 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 GGA1Q9UJY5 639 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
CHFR-219ENST00000541341 GRM8O00222 908 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 SGSM2O43147 1006 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
CHFR-219ENST00000541341 SOX10P56693 466 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 NOGQ13253 232 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 SCARF1Q14162 830 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 SSH3Q8TE77 659 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 HHIPL1Q96JK4 782 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 NUP62CLQ9H1M0 184 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
CHFR-219ENST00000541341 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
CHFR-219ENST00000541341 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
CHFR-219ENST00000541341 SULF1Q8IWU6 871 aa12.17□□□□□ -0.46
CHFR-219ENST00000541341 KCNB2Q92953 911 aa12.17□□□□□ -0.46
CHFR-219ENST00000541341 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
CHFR-219ENST00000541341 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
CHFR-219ENST00000541341 TCHHQ07283 1943 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 CA12O43570 354 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
CHFR-219ENST00000541341 PDE8AO60658 829 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
CHFR-219ENST00000541341 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
CHFR-219ENST00000541341 SYT1P21579 422 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 RPS12P25398 132 aaKnown RBP12.16□□□□□ -0.46
CHFR-219ENST00000541341 KRT32Q14532 448 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 ANKRD18AQ8IVF6 992 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 TTC14Q96N46 770 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 RNF186Q9NXI6 227 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
CHFR-219ENST00000541341 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
CHFR-219ENST00000541341 CFAP45Q9UL16 551 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms