RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
LMO3-224ENST00000540848 VGLL2Q8N8G2 317 aa12.03□□□□□ -0.48
LMO3-224ENST00000540848 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
LMO3-224ENST00000540848 GREM2Q9H772 168 aa12.03□□□□□ -0.48
LMO3-224ENST00000540848 GRPEL1Q9HAV7 217 aa12.03□□□□□ -0.48
LMO3-224ENST00000540848 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
LMO3-224ENST00000540848 UBN2Q6ZU65 1347 aa12.03□□□□□ -0.48
LMO3-224ENST00000540848 NUTM2BA6NNL0 878 aaPredicted RBP12.02□□□□□ -0.49
LMO3-224ENST00000540848 NUTM2EB1AL46 878 aaPredicted RBP12.02□□□□□ -0.49
LMO3-224ENST00000540848 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 PDE8BO95263 885 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 SYT1P21579 422 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 FUT2Q10981 343 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
LMO3-224ENST00000540848 ME3Q16798 604 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 MORN1Q5T089 497 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
LMO3-224ENST00000540848 FBXL16Q8N461 479 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 LPIN2Q92539 896 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 APPBP2Q92624 585 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 ATRNO75882 1429 aa12.02□□□□□ -0.49
LMO3-224ENST00000540848 F13A1P00488 732 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 CYP21A2P08686 494 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 XRCC6P12956 609 aaKnown RBP eCLIP12.01□□□□□ -0.49
LMO3-224ENST00000540848 GJB2P29033 226 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 SLC19A1P41440 591 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 GCGRP47871 477 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 TPCN1Q9ULQ1 816 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 MAST3O60307 1309 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 CPA1P15085 419 aa12.01□□□□□ -0.49
LMO3-224ENST00000540848 ARID4AP29374 1257 aaPredicted RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 FKBP4Q02790 459 aaKnown RBP eCLIP12.01□□□□□ -0.49
LMO3-224ENST00000540848 TOB2Q14106 344 aaPredicted RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
LMO3-224ENST00000540848 CNTNAP4Q9C0A0 1308 aa12□□□□□ -0.49
LMO3-224ENST00000540848 AKAP11Q9UKA4 1901 aa12□□□□□ -0.49
LMO3-224ENST00000540848 MYH14Q7Z406 1995 aaKnown RBP12□□□□□ -0.49
LMO3-224ENST00000540848 SLC5A1P13866 664 aa12□□□□□ -0.49
LMO3-224ENST00000540848 ITPK1Q13572 414 aa12□□□□□ -0.49
LMO3-224ENST00000540848 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
LMO3-224ENST00000540848 THAP11Q96EK4 314 aa12□□□□□ -0.49
LMO3-224ENST00000540848 ACSBG1Q96GR2 724 aa12□□□□□ -0.49
LMO3-224ENST00000540848 SEC62Q99442 399 aaKnown RBP12□□□□□ -0.49
LMO3-224ENST00000540848 AGXT2Q9BYV1 514 aa12□□□□□ -0.49
LMO3-224ENST00000540848 SLC6A16Q9GZN6 736 aa12□□□□□ -0.49
LMO3-224ENST00000540848 DDX60Q8IY21 1712 aaKnown RBP12□□□□□ -0.49
LMO3-224ENST00000540848 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 LARGE1O95461 756 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 FGFR2P21802 821 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 ADORA1P30542 326 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 PIP4K2BP78356 416 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 UBE3CQ15386 1083 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
LMO3-224ENST00000540848 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 SUSD4Q5VX71 490 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 CAVIN1Q6NZI2 390 aaKnown RBP11.99□□□□□ -0.49
LMO3-224ENST00000540848 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 ANP32BQ92688 251 aaKnown RBP11.99□□□□□ -0.49
LMO3-224ENST00000540848 GTF3C6Q969F1 213 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
LMO3-224ENST00000540848 MPHOSPH8Q99549 860 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 WDR19Q8NEZ3 1342 aa11.99□□□□□ -0.49
LMO3-224ENST00000540848 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
LMO3-224ENST00000540848 NTSR2O95665 410 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 IGHMBP2P38935 993 aaKnown RBP11.98□□□□□ -0.49
LMO3-224ENST00000540848 ZAP70P43403 619 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 HMGN5P82970 282 aaKnown RBP11.98□□□□□ -0.49
LMO3-224ENST00000540848 SPRYD7Q5W111 196 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
LMO3-224ENST00000540848 TRAF7Q6Q0C0 670 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 SPSB2Q99619 263 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 MTMR6Q9Y217 621 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 SCN7AQ01118 1682 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 LAMA4Q16363 1823 aa11.98□□□□□ -0.49
LMO3-224ENST00000540848 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 ZMYM6O95789 1325 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 MCAMP43121 646 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 UBE2HP62256 183 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 FGD1P98174 961 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 WASHC4Q2M389 1173 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 OSBP2Q969R2 916 aa11.97□□□□□ -0.49
LMO3-224ENST00000540848 ZNF274Q96GC6 653 aaPredicted RBP11.97□□□□□ -0.49
LMO3-224ENST00000540848 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms