RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
ATL3-204ENST00000540699 GPATCH3Q96I76 525 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
ATL3-204ENST00000540699 HAUS7Q99871 368 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 GAKO14976 1311 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 FOCADQ5VW36 1801 aa12.83□□□□□ -0.36
ATL3-204ENST00000540699 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
ATL3-204ENST00000540699 ERC2O15083 957 aa12.82□□□□□ -0.36
ATL3-204ENST00000540699 MECOMQ03112 1051 aa12.82□□□□□ -0.36
ATL3-204ENST00000540699 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 CYP4F22Q6NT55 531 aa12.82□□□□□ -0.36
ATL3-204ENST00000540699 TMED8Q6PL24 325 aaPredicted RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
ATL3-204ENST00000540699 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
ATL3-204ENST00000540699 ECE1P42892 770 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 RGS19P49795 217 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 TTF1Q15361 905 aaPredicted RBP12.81□□□□□ -0.36
ATL3-204ENST00000540699 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 APOBEC3HQ6NTF7 200 aaKnown RBP12.81□□□□□ -0.36
ATL3-204ENST00000540699 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
ATL3-204ENST00000540699 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 DAGLAQ9Y4D2 1042 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
ATL3-204ENST00000540699 GSTO1P78417 241 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
ATL3-204ENST00000540699 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 DZIP1Q86YF9 867 aaKnown RBP12.8□□□□□ -0.36
ATL3-204ENST00000540699 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 PAG1Q9NWQ8 432 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 LRP2BPQ9P2M1 347 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
ATL3-204ENST00000540699 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 MLLT1Q03111 559 aaPredicted RBP12.79□□□□□ -0.36
ATL3-204ENST00000540699 GRM1Q13255 1194 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 FKBP1CQ5VVH2 108 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
ATL3-204ENST00000540699 RAI14Q9P0K7 980 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
ATL3-204ENST00000540699 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 GOLIM4O00461 696 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 MYO1BO43795 1136 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 AOC2O75106 756 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 LDHCP07864 332 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 CHMLP26374 656 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
ATL3-204ENST00000540699 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 DNAJC2Q99543 621 aaKnown RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
ATL3-204ENST00000540699 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
ATL3-204ENST00000540699 TCRBV5S4A2TA0A5A2 114 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
ATL3-204ENST00000540699 MAP2K2P36507 400 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
ATL3-204ENST00000540699 RHBDL3P58872 404 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 PPP4CP60510 307 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 NAA16Q6N069 864 aaPredicted RBP12.77□□□□□ -0.37
ATL3-204ENST00000540699 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 RILPL2Q969X0 211 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
ATL3-204ENST00000540699 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 ADM5C9JUS6 153 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
ATL3-204ENST00000540699 PDE6AP16499 860 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 BTDP43251 543 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 ADGRA1Q86SQ6 560 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 KBTBD3Q8NAB2 608 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 ZNF408Q9H9D4 720 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 PPP2R3BQ9Y5P8 575 aa12.76□□□□□ -0.37
ATL3-204ENST00000540699 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
ATL3-204ENST00000540699 MYH1P12882 1939 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 CYP7A1P22680 504 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms