RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 NOL10Q9BSC4 688 aaKnown RBP12.79□□□□□ -0.36
CDCA3-208ENST00000540683 GPR108Q9NPR9 543 aa12.79□□□□□ -0.36
CDCA3-208ENST00000540683 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
CDCA3-208ENST00000540683 CASP8AP2Q9UKL3 1982 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 USP2O75604 605 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-208ENST00000540683 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
CDCA3-208ENST00000540683 ERICH6Q7L0X2 663 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
CDCA3-208ENST00000540683 XAGE2Q96GT9 111 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 ZIC5Q96T25 663 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
CDCA3-208ENST00000540683 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
CDCA3-208ENST00000540683 FKTNO75072 461 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 PHKA1P46020 1223 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 ATP8B2P98198 1209 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 TFCP2Q12800 502 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 CERS3Q8IU89 383 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 MCOLN1Q9GZU1 580 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 ABCF2Q9UG63 623 aa12.77□□□□□ -0.37
CDCA3-208ENST00000540683 LAMB1P07942 1786 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 CCDC85CA6NKD9 419 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 GPR25O00155 361 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 HMMRO75330 724 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 ENTPD3O75355 529 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 PLCG2P16885 1265 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 TIMM10P62072 90 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
CDCA3-208ENST00000540683 ERO1BQ86YB8 467 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■■■■■ 42.5
CDCA3-208ENST00000540683 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
CDCA3-208ENST00000540683 TEPSINQ96N21 525 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 DAGLAQ9Y4D2 1042 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
CDCA3-208ENST00000540683 SSC5DA1L4H1 1573 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 TESPA1A2RU30 521 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-208ENST00000540683 SURF6O75683 361 aaKnown RBP12.75□□□□□ -0.37
CDCA3-208ENST00000540683 BAG3O95817 575 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 CETPP11597 493 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
CDCA3-208ENST00000540683 PRDX5P30044 214 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 ERO1AQ96HE7 468 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 DDX19BQ9UMR2 479 aa12.75□□□□□ -0.37
CDCA3-208ENST00000540683 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 GAKO14976 1311 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 PPATQ06203 517 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 VGLL4Q14135 290 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 POLA2Q14181 598 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 CDC42EP5Q6NZY7 148 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
CDCA3-208ENST00000540683 IDI2Q9BXS1 227 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 ELP3Q9H9T3 547 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 LRP2BPQ9P2M1 347 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
CDCA3-208ENST00000540683 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
CDCA3-208ENST00000540683 MROH7-TTC4A0A0A0MT08 1334 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-208ENST00000540683 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 ADORA1P30542 326 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 PPIL2Q13356 520 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 KIF22Q14807 665 aa12.73□□□□□ -0.37
CDCA3-208ENST00000540683 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-208ENST00000540683 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-208ENST00000540683 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
CDCA3-208ENST00000540683 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 GRIK5Q16478 980 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-208ENST00000540683 RPAP2Q8IXW5 612 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-208ENST00000540683 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-208ENST00000540683 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
CDCA3-208ENST00000540683 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 GNRH1P01148 92 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 CACNB3P54284 484 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 TCP10Q12799 353 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 CCL15Q16663 113 aa12.71□□□□□ -0.37
CDCA3-208ENST00000540683 NOL9Q5SY16 702 aaKnown RBP12.71□□□□□ -0.37
CDCA3-208ENST00000540683 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms