RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC00943-206ENST00000540250 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
LINC00943-206ENST00000540250 FMR1NBQ8N0W7 255 aaPredicted RBP10.41□□□□□ -0.74
LINC00943-206ENST00000540250 SSBP4Q9BWG4 385 aaPredicted RBP10.41□□□□□ -0.74
LINC00943-206ENST00000540250 GZF1Q9H116 711 aaPredicted RBP10.41□□□□□ -0.74
LINC00943-206ENST00000540250 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
LINC00943-206ENST00000540250 LARGE2Q8N3Y3 721 aa10.4□□□□□ -0.74
LINC00943-206ENST00000540250 USP21Q9UK80 565 aa10.4□□□□□ -0.74
LINC00943-206ENST00000540250 KIF1AQ12756 1690 aa10.4□□□□□ -0.74
LINC00943-206ENST00000540250 SSH2Q76I76 1423 aa10.4□□□□□ -0.75
LINC00943-206ENST00000540250 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.75
LINC00943-206ENST00000540250 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.75
LINC00943-206ENST00000540250 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 COL3A1P02461 1466 aaPredicted RBP10.39□□□□□ -0.75
LINC00943-206ENST00000540250 MTHFSP49914 203 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 LCE3BQ5TA77 95 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
LINC00943-206ENST00000540250 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
LINC00943-206ENST00000540250 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 DCCP43146 1447 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
LINC00943-206ENST00000540250 SMG6Q86US8 1419 aaKnown RBP10.39□□□□□ -0.75
LINC00943-206ENST00000540250 TTC21BQ7Z4L5 1316 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 TTC21AQ8NDW8 1320 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 XIRP1Q702N8 1843 aaKnown RBP10.38□□□□□ -0.75
LINC00943-206ENST00000540250 DKK1O94907 266 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 NME9Q86XW9 330 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 SIX5Q8N196 739 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
LINC00943-206ENST00000540250 C2orf49Q9BVC5 232 aaPredicted RBP10.38□□□□□ -0.75
LINC00943-206ENST00000540250 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
LINC00943-206ENST00000540250 LRRC7Q96NW7 1537 aa10.38□□□□□ -0.75
LINC00943-206ENST00000540250 RGS9O75916 674 aaPredicted RBP10.37□□□□□ -0.75
LINC00943-206ENST00000540250 NFKB1P19838 968 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 ELOAQ14241 798 aaKnown RBP10.37□□□□□ -0.75
LINC00943-206ENST00000540250 NGDNQ8NEJ9 315 aaKnown RBP10.37□□□□□ -0.75
LINC00943-206ENST00000540250 PMFBP1Q8TBY8 1022 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 COG3Q96JB2 828 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 MARF1Q9Y4F3 1742 aaKnown RBP10.37□□□□□ -0.75
LINC00943-206ENST00000540250 AATKQ6ZMQ8 1374 aa10.37□□□□□ -0.75
LINC00943-206ENST00000540250 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
LINC00943-206ENST00000540250 TMEM88BA6NKF7 163 aa10.36□□□□□ -0.75
LINC00943-206ENST00000540250 STAG2Q8N3U4 1231 aa10.36□□□□□ -0.75
LINC00943-206ENST00000540250 TMEM94Q12767 1356 aa10.36□□□□□ -0.75
LINC00943-206ENST00000540250 CCINQ13939 588 aa10.35□□□□□ -0.75
LINC00943-206ENST00000540250 HIF1AQ16665 826 aa10.35□□□□□ -0.75
LINC00943-206ENST00000540250 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
LINC00943-206ENST00000540250 SCG3Q8WXD2 468 aaKnown RBP10.35□□□□□ -0.75
LINC00943-206ENST00000540250 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
LINC00943-206ENST00000540250 TRPM3Q9HCF6 1732 aaPredicted RBP10.34□□□□□ -0.75
LINC00943-206ENST00000540250 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
LINC00943-206ENST00000540250 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
LINC00943-206ENST00000540250 USP31Q70CQ4 1352 aa10.34□□□□□ -0.75
LINC00943-206ENST00000540250 IQSEC2Q5JU85 1478 aa10.34□□□□□ -0.75
LINC00943-206ENST00000540250 C1orf167Q5SNV9 1468 aa10.34□□□□□ -0.75
LINC00943-206ENST00000540250 MST1RQ04912 1400 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 GRNP28799 593 aaKnown RBP10.33□□□□□ -0.76
LINC00943-206ENST00000540250 IER5Q5VY09 327 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 FAM35AQ86V20 835 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 WFDC12Q8WWY7 111 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 POLKQ9UBT6 870 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 BCS1LQ9Y276 419 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 RBM19Q9Y4C8 960 aaKnown RBP10.33□□□□□ -0.76
LINC00943-206ENST00000540250 PEAK1Q9H792 1746 aa10.33□□□□□ -0.76
LINC00943-206ENST00000540250 MSH6P52701 1360 aa10.32□□□□□ -0.76
LINC00943-206ENST00000540250 FAM196BA6NMK8 535 aa10.32□□□□□ -0.76
LINC00943-206ENST00000540250 CPB1P15086 417 aa10.32□□□□□ -0.76
LINC00943-206ENST00000540250 FBXO11Q86XK2 927 aa10.32□□□□□ -0.76
LINC00943-206ENST00000540250 DMGDHQ9UI17 866 aaKnown RBP10.32□□□□□ -0.76
LINC00943-206ENST00000540250 NOVA2Q9UNW9 492 aaKnown RBP10.32□□□□□ -0.76
LINC00943-206ENST00000540250 NUDCQ9Y266 331 aa10.32□□□□□ -0.76
LINC00943-206ENST00000540250 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 ATF3P18847 181 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 IREB2P48200 963 aaKnown RBP10.31□□□□□ -0.76
LINC00943-206ENST00000540250 PLAURQ03405 335 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 GRIK5Q16478 980 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
LINC00943-206ENST00000540250 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 LPIN3Q9BQK8 851 aa10.31□□□□□ -0.76
LINC00943-206ENST00000540250 DIAPH1O60610 1272 aaKnown RBP10.3□□□□□ -0.76
LINC00943-206ENST00000540250 NOS3P29474 1203 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 RTN1Q16799 776 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 CCDC146Q8IYE0 955 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 DTWD1Q8N5C7 304 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 NGEFQ8N5V2 710 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 RUNDC1Q96C34 613 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 ZMIZ1Q9ULJ6 1067 aa10.3□□□□□ -0.76
LINC00943-206ENST00000540250 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
LINC00943-206ENST00000540250 ALS2Q96Q42 1657 aa10.29□□□□□ -0.76
LINC00943-206ENST00000540250 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
LINC00943-206ENST00000540250 USP17L10C9JJH3 530 aa10.29□□□□□ -0.76
LINC00943-206ENST00000540250 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms