RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
PBX1-212ENST00000540236 ANXA1P04083 346 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 RRAGBQ5VZM2 374 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 REXO1L1PQ8IX06 675 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 PIK3C2GO75747 1445 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 GOLGA8KD6RF30 607 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
PBX1-212ENST00000540236 ARID5AQ03989 594 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 TAF4BQ92750 862 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
PBX1-212ENST00000540236 CCDC151A5D8V7 595 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 TDRD12Q587J7 1177 aaKnown RBP12.47□□□□□ -0.41
PBX1-212ENST00000540236 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 SLC40A1Q9NP59 571 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 A1BGP04217 495 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 STAMQ92783 540 aa12.47□□□□□ -0.41
PBX1-212ENST00000540236 ZKSCAN4Q969J2 545 aaPredicted RBP12.47□□□□□ -0.41
PBX1-212ENST00000540236 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
PBX1-212ENST00000540236 KCTD19Q17RG1 926 aaPredicted RBP12.46□□□□□ -0.41
PBX1-212ENST00000540236 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
PBX1-212ENST00000540236 CDC23Q9UJX2 597 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 UPP2O95045 317 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 EPS15P42566 896 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.41
PBX1-212ENST00000540236 SYCP3Q8IZU3 236 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 SAMD15Q9P1V8 674 aa12.46□□□□□ -0.41
PBX1-212ENST00000540236 LRRD1A4D1F6 860 aa12.46□□□□□ -0.42
PBX1-212ENST00000540236 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.42
PBX1-212ENST00000540236 JAKMIP2Q96AA8 810 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 KCNK9Q9NPC2 374 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
PBX1-212ENST00000540236 GRAMD1CQ8IYS0 662 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 MORC4Q8TE76 937 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 CACNA2D3Q8IZS8 1091 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 EME2A4GXA9 379 aaPredicted RBP12.45□□□□□ -0.42
PBX1-212ENST00000540236 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
PBX1-212ENST00000540236 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 MUM1Q2TAK8 710 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 C8orf74Q6P047 294 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 RRP36Q96EU6 259 aaKnown RBP12.45□□□□□ -0.42
PBX1-212ENST00000540236 TAB2Q9NYJ8 693 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 SPAG5Q96R06 1193 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 PLIN2Q99541 437 aa12.45□□□□□ -0.42
PBX1-212ENST00000540236 HIP1O00291 1037 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 KIF3CO14782 793 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 KIAA1468Q9P260 1216 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 PCDHA7Q9UN72 937 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 NFE2L3Q9Y4A8 694 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 FCHSD2O94868 740 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 TFR2Q9UP52 801 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
PBX1-212ENST00000540236 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 VWA3AA6NCI4 1184 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
PBX1-212ENST00000540236 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 KAT2BQ92831 832 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 CUTAO60888 179 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 MMP14P50281 582 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
PBX1-212ENST00000540236 CCDC63Q8NA47 563 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 ZNF185O15231 689 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 SEC24CP53992 1094 aa12.44□□□□□ -0.42
PBX1-212ENST00000540236 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 TRIM21P19474 475 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 CASP14P31944 242 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 GBP1P32455 592 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 SUGP1Q8IWZ8 645 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 GBP5Q96PP8 586 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 DIAPH2O60879 1101 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 SNUPNO95149 360 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 MYZAPP0CAP1 466 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 HDLBPQ00341 1268 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 KIAA0825Q8IV33 1275 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 ALS2CR12Q96Q35 445 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 H0Y3Z8 333 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 BUB1O43683 1085 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 USP4Q13107 963 aa12.43□□□□□ -0.42
PBX1-212ENST00000540236 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
PBX1-212ENST00000540236 STAG1Q8WVM7 1258 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms