RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 FKBP1CQ5VVH2 108 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 ERO1BQ86YB8 467 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 LPIN2Q92539 896 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 DAGLAQ9Y4D2 1042 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 PTPRFP10586 1907 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 RPAP1Q9BWH6 1393 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 CETPP11597 493 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 PRDX5P30044 214 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 NFIAQ12857 509 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 SUGT1Q9Y2Z0 365 aa17.81■□□□□ 0.44
SEMA4D-222ENST00000540183 PHIPQ8WWQ0 1821 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 PPIL2Q13356 520 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 ZFPM1Q8IX07 1006 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 PA2G4Q9UQ80 394 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-222ENST00000540183 TLR2O60603 784 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 CTGFP29279 349 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 SNAPC2Q13487 334 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 SLC9C1Q4G0N8 1177 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 DCAF15Q66K64 600 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 FAM198AQ9UFP1 575 aa17.79■□□□□ 0.44
SEMA4D-222ENST00000540183 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 ADORA1P30542 326 aa17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 PHKA1P46020 1223 aa17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 NOB1Q9ULX3 412 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 DOCK1Q14185 1865 aa17.78■□□□□ 0.44
SEMA4D-222ENST00000540183 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
SEMA4D-222ENST00000540183 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
SEMA4D-222ENST00000540183 USP40Q9NVE5 1235 aa17.77■□□□□ 0.44
SEMA4D-222ENST00000540183 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
SEMA4D-222ENST00000540183 CPA4Q9UI42 421 aa17.77■□□□□ 0.44
SEMA4D-222ENST00000540183 CEP290O15078 2479 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 PPATQ06203 517 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 MOGSQ13724 837 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 HOOK2Q96ED9 719 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 TMEM106CQ9BVX2 250 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 ZNF112Q9UJU3 913 aa17.76■□□□□ 0.43
SEMA4D-222ENST00000540183 ATAD5Q96QE3 1844 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 CIAO1O76071 339 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 SLC4A8Q2Y0W8 1093 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 C17orf99Q6UX52 265 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 MEIS3Q99687 375 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 DOCK3Q8IZD9 2030 aa17.75■□□□□ 0.43
SEMA4D-222ENST00000540183 ADGRA2Q96PE1 1338 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 PDHXO00330 501 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 HABP4Q5JVS0 413 aaKnown RBP17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 NBPF11Q86T75 865 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 KCNH4Q9UQ05 1017 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
SEMA4D-222ENST00000540183 SALL1Q9NSC2 1324 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 WDHD1O75717 1129 aaPredicted RBP17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 RGS3P49796 1198 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 TIMM10P62072 90 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 KIF22Q14807 665 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 CCDC102BQ68D86 513 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 SH3BP5LQ7L8J4 393 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 ANKRD23Q86SG2 305 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 TRIM47Q96LD4 638 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 DENND2AQ9ULE3 1009 aa17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 MYO5AQ9Y4I1 1855 aaKnown RBP17.73■□□□□ 0.43
SEMA4D-222ENST00000540183 RFX7Q2KHR2 1363 aa17.72■□□□□ 0.43
SEMA4D-222ENST00000540183 IL15P40933 162 aaPredicted RBP17.72■□□□□ 0.43
SEMA4D-222ENST00000540183 MTFR1Q15390 333 aa17.72■□□□□ 0.43
SEMA4D-222ENST00000540183 NOL9Q5SY16 702 aaKnown RBP17.72■□□□□ 0.43
SEMA4D-222ENST00000540183 FBXO3Q9UK99 471 aa17.72■□□□□ 0.43
SEMA4D-222ENST00000540183 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 OSBPP22059 807 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 PSMC4P43686 418 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 GPAT2Q6NUI2 795 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 COPRSQ9NQ92 184 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
SEMA4D-222ENST00000540183 GAKO14976 1311 aa17.71■□□□□ 0.42
SEMA4D-222ENST00000540183 SEMA3EO15041 775 aa17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 CYP2C8P10632 490 aa17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 SRRDQ9UH36 339 aa17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 TNNQ9UQP3 1299 aa17.7■□□□□ 0.42
SEMA4D-222ENST00000540183 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms