RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 RNF208Q9H0X6 261 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 PRO3102Q9H379 93 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 MYH16Q9H6N6 1097 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 TDRD3Q9H7E2 651 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 SRRDQ9UH36 339 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 TTF2Q9UNY4 1162 aaKnown RBP7.55□□□□□ -1.2
CPSF7-219ENST00000539952 PCDHAC2Q9Y5I4 1007 aa7.55□□□□□ -1.2
CPSF7-219ENST00000539952 FAM205AQ6ZU69 1335 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 TCP10L2B9ZVM9 353 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-219ENST00000539952 HIBADHP31937 336 aaKnown RBP7.54□□□□□ -1.2
CPSF7-219ENST00000539952 PPATQ06203 517 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 VGLL4Q14135 290 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 UBE4AQ14139 1066 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 MTFR1Q15390 333 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 MFSD14BQ5SR56 506 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 GPR153Q6NV75 609 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 POTEHQ6S545 545 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 ERICH6Q7L0X2 663 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 UBE2Q1Q7Z7E8 422 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
CPSF7-219ENST00000539952 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
CPSF7-219ENST00000539952 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 CACNA1AO00555 2505 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 CEP290O15078 2479 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 SNAP23O00161 211 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 APAF1O14727 1248 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 IRF6O14896 467 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 ZBTB7BO15156 539 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-219ENST00000539952 EVI5O60447 810 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 SGPL1O95470 568 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 CCL5P13501 91 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 CASP7P55210 303 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 PPIL2Q13356 520 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 CCDC57Q2TAC2 916 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 FKBP1CQ5VVH2 108 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 DCAF15Q66K64 600 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 FAM83AQ86UY5 434 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 LINS1Q8NG48 757 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 ARHGAP39Q9C0H5 1083 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 TMEM39BQ9GZU3 492 aa7.53□□□□□ -1.2
CPSF7-219ENST00000539952 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CPSF7-219ENST00000539952 RBBP6Q7Z6E9 1792 aaKnown RBP7.53□□□□□ -1.2
CPSF7-219ENST00000539952 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
CPSF7-219ENST00000539952 SSC5DA1L4H1 1573 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 PLIN1O60240 522 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 OSBPP22059 807 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 BMP8BP34820 402 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 CRKP46108 304 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 TAF7LQ5H9L4 462 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 TSPYL6Q8N831 410 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 SLAIN1Q8ND83 568 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 U2AF1L4Q8WU68 220 aaKnown RBP7.52□□□□□ -1.21
CPSF7-219ENST00000539952 TBC1D22AQ8WUA7 517 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 DNAAF4Q8WXU2 420 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 SHISA4Q96DD7 197 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 FAM84BQ96KN1 310 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-219ENST00000539952 CNNM1Q9NRU3 951 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 TMOD2Q9NZR1 351 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 AOX1Q06278 1338 aa7.52□□□□□ -1.21
CPSF7-219ENST00000539952 PDHXO00330 501 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 CXCL11O14625 94 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 FARP2O94887 1054 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-219ENST00000539952 TFRCP02786 760 aaKnown RBP7.51□□□□□ -1.21
CPSF7-219ENST00000539952 CLCN6P51797 869 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 ATN1P54259 1190 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-219ENST00000539952 FCGRTP55899 365 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 FOXO4P98177 505 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 HNRNPUQ00839 825 aaKnown RBP eCLIP7.51□□□□□ -1.21
CPSF7-219ENST00000539952 VPS37DQ86XT2 251 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 ZKSCAN4Q969J2 545 aaPredicted RBP7.51□□□□□ -1.21
CPSF7-219ENST00000539952 TEKT1Q969V4 418 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 WRNIP1Q96S55 665 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 ZNF341Q9BYN7 854 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 CHMP3Q9Y3E7 222 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 A0A0C4DFX4 3053 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 MYPNQ86TC9 1320 aa7.51□□□□□ -1.21
CPSF7-219ENST00000539952 FRAT2O75474 233 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-219ENST00000539952 GABBR2O75899 941 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 CTGFP29279 349 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 FLIIQ13045 1269 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 FKBP5Q13451 457 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-219ENST00000539952 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
CPSF7-219ENST00000539952 CAVIN4Q5BKX8 364 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 LMBR1LQ6UX01 489 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 G2E3Q7L622 706 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 FASTKD5Q7L8L6 764 aaKnown RBP7.5□□□□□ -1.21
CPSF7-219ENST00000539952 FBXO33Q7Z6M2 555 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 ZDHHC15Q96MV8 337 aa7.5□□□□□ -1.21
CPSF7-219ENST00000539952 PARK7Q99497 189 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms