RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 PLCB4Q15147 1175 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PROSER3Q2NL68 480 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 TSNAXIP1Q2TAA8 658 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 NME8Q8N427 588 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 HDAC7Q8WUI4 952 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 ZFAND2BQ8WV99 257 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 IL17RAQ96F46 866 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 INTS4Q96HW7 963 aaKnown RBP6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 GOPCQ9HD26 462 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SOS2Q07890 1332 aaPredicted RBP6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 TTC41PQ6P2S7 1318 aa6.6□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SRGAP3O43295 1099 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PEX19P40855 299 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 ZNF75DP51815 510 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SF3B2Q13435 895 aaKnown RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 ZNF790Q6PG37 636 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SARM1Q6SZW1 724 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 CACTINQ8WUQ7 758 aaKnown RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 C17orf50Q8WW18 174 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PAGR1Q9BTK6 254 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 LRRCC1Q9C099 1032 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 OSBPL3Q9H4L5 887 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SALL3Q9BXA9 1300 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SCN11AQ9UI33 1791 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PSDA5PKW4 1024 aaPredicted RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 CYP27B1O15528 508 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 FMNL1O95466 1100 aaPredicted RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SDSP20132 328 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 APOBRQ0VD83 1088 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 LRRC8AQ8IWT6 810 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PARD3BQ8TEW8 1205 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 SAAL1Q96ER3 474 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 RMI1Q9H9A7 625 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 MRC1P22897 1456 aa6.59□□□□□ -1.35
RAB3GAP1-207ENST00000539493 PKD1L3Q7Z443 1732 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC151A5D8V7 595 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LIN7AO14910 233 aaPredicted RBP6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 OPA1O60313 960 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PYGBP11216 843 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 USP5P45974 858 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PDE1AP54750 535 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 LRMPQ12912 555 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SLC39A6Q13433 755 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 BRD3Q15059 726 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ACBD5Q5T8D3 534 aaPredicted RBP6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TDRD7Q8NHU6 1098 aaKnown RBP6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SSH3Q8TE77 659 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RBM17Q96I25 401 aaKnown RBP6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RBM42Q9BTD8 480 aaKnown RBP6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TRIM7Q9C029 511 aa6.59□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GCLCP48506 637 aaPredicted RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RSRC2Q7L4I2 434 aaKnown RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MYLK4Q86YV6 388 aaPredicted RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FAM71BQ8TC56 605 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DCAF5Q96JK2 942 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KIF9Q9HAQ2 790 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 UTP6Q9NYH9 597 aaKnown RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MAP3K2Q9Y2U5 619 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PPFIA3O75145 1194 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 NAT1P18440 290 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCZ1BP86790 482 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCZ1P86791 482 aaPredicted RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 POLA2Q14181 598 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PDIA6Q15084 440 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PPP1R42Q7Z4L9 355 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 YTHDF3Q7Z739 585 aaKnown RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 SPATS2Q86XZ4 545 aaKnown RBP6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 UBXN4Q92575 508 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ARFGAP3Q9NP61 516 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 HYPKQ9NX55 129 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PYGLP06737 847 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PAX3P23760 479 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 GCKP35557 465 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 UBE2HP62256 183 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DHX8Q14562 1220 aaKnown RBP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 KSR2Q6VAB6 950 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 CCDC50Q8IVM0 306 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FAM81AQ8TBF8 368 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 WDR17Q8IZU2 1322 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 C5P01031 1676 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 USP27XA6NNY8 438 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 RASSF9O75901 435 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MYL1P05976 194 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MCM2P49736 904 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 FBXW10Q5XX13 1052 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TSHZ3Q63HK5 1081 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 TRIM42Q8IWZ5 723 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 MRFAP1L1Q96HT8 127 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 OSBPL9Q96SU4 736 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 PRDM11Q9NQV5 511 aa6.57□□□□□ -1.36
RAB3GAP1-207ENST00000539493 ABCF2Q9UG63 623 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms