RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 FGFR2P21802 821 aa10.18□□□□□ -0.78
CD4-209ENST00000539492 KIF22Q14807 665 aa10.18□□□□□ -0.78
CD4-209ENST00000539492 HABP4Q5JVS0 413 aaKnown RBP10.18□□□□□ -0.78
CD4-209ENST00000539492 KLHDC4Q8TBB5 520 aa10.18□□□□□ -0.78
CD4-209ENST00000539492 ZNF341Q9BYN7 854 aa10.18□□□□□ -0.78
CD4-209ENST00000539492 IRF6O14896 467 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 GNRH1P01148 92 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 SLC5A1P13866 664 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 PRMT2P55345 433 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 LACTBP83111 547 aaPredicted RBP10.17□□□□□ -0.78
CD4-209ENST00000539492 PPATQ06203 517 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 WDR66Q8TBY9 1149 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 ZKSCAN4Q969J2 545 aaPredicted RBP10.17□□□□□ -0.78
CD4-209ENST00000539492 ARHGAP39Q9C0H5 1083 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 USP44Q9H0E7 712 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 PHIPQ8WWQ0 1821 aa10.17□□□□□ -0.78
CD4-209ENST00000539492 E9PSI1 815 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 EYA2O00167 538 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 RFX5P48382 616 aaPredicted RBP10.16□□□□□ -0.78
CD4-209ENST00000539492 FAM151AQ8WW52 585 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 SSH1Q8WYL5 1049 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 LPIN2Q92539 896 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 DAGLAQ9Y4D2 1042 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 DOCK1Q14185 1865 aa10.16□□□□□ -0.78
CD4-209ENST00000539492 INPP5BP32019 993 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.78
CD4-209ENST00000539492 CDC42EP5Q6NZY7 148 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 C17orf99Q6UX52 265 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 MIGA2Q7L4E1 593 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 ANKRD23Q86SG2 305 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.15□□□□□ -0.78
CD4-209ENST00000539492 FBXO3Q9UK99 471 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.78
CD4-209ENST00000539492 RANBP2P49792 3224 aaKnown RBP10.14□□□□□ -0.79
CD4-209ENST00000539492 ADGRA2Q96PE1 1338 aa10.14□□□□□ -0.79
CD4-209ENST00000539492 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CD4-209ENST00000539492 DIXDC1Q155Q3 683 aa10.14□□□□□ -0.79
CD4-209ENST00000539492 NOL9Q5SY16 702 aaKnown RBP10.14□□□□□ -0.79
CD4-209ENST00000539492 SH3TC2Q8TF17 1288 aa10.14□□□□□ -0.79
CD4-209ENST00000539492 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
CD4-209ENST00000539492 ZNF112Q9UJU3 913 aa10.14□□□□□ -0.79
CD4-209ENST00000539492 ATAD5Q96QE3 1844 aa10.14□□□□□ -0.79
CD4-209ENST00000539492 SZT2Q5T011 3432 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 SALL1Q9NSC2 1324 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 PDHXO00330 501 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 CIAO1O76071 339 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
CD4-209ENST00000539492 LDHBP07195 334 aaKnown RBP10.13□□□□□ -0.79
CD4-209ENST00000539492 HOXD10P28358 340 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 PRDX5P30044 214 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 PSMC4P43686 418 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 TCP10Q12799 353 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 NFIAQ12857 509 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 ATP2B3Q16720 1220 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 ATG9AQ7Z3C6 839 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 PARK7Q99497 189 aaKnown RBP10.13□□□□□ -0.79
CD4-209ENST00000539492 CEP126Q9P2H0 1117 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 SRRDQ9UH36 339 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 CPA4Q9UI42 421 aa10.13□□□□□ -0.79
CD4-209ENST00000539492 CXCL11O14625 94 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 SEMA3EO15041 775 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 ZBTB22O15209 634 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
CD4-209ENST00000539492 OSBPP22059 807 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 CTGFP29279 349 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
CD4-209ENST00000539492 MOGSQ13724 837 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 RAET1EQ8TD07 263 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 TRIM47Q96LD4 638 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 SIL1Q9H173 461 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 SMC4Q9NTJ3 1288 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 USP40Q9NVE5 1235 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 DENND2AQ9ULE3 1009 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 ATRNL1Q5VV63 1379 aa10.12□□□□□ -0.79
CD4-209ENST00000539492 MYPNQ86TC9 1320 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
CD4-209ENST00000539492 BCRP11274 1271 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 GRK4P32298 578 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 IL15P40933 162 aaPredicted RBP10.11□□□□□ -0.79
CD4-209ENST00000539492 PHKA1P46020 1223 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 SLFN5Q08AF3 891 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 MTFR1Q15390 333 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 ZGPATQ8N5A5 531 aaKnown RBP10.11□□□□□ -0.79
CD4-209ENST00000539492 NKX2-3Q8TAU0 364 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 SHISA4Q96DD7 197 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 HDAC5Q9UQL6 1122 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 RFX7Q2KHR2 1363 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 ALPK3Q96L96 1907 aa10.11□□□□□ -0.79
CD4-209ENST00000539492 GAKO14976 1311 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 PHF20L1A8MW92 1017 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 ENTPD3O75355 529 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
CD4-209ENST00000539492 RGS3P49796 1198 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 FCGRTP55899 365 aa10.1□□□□□ -0.79
CD4-209ENST00000539492 FASTKD5Q7L8L6 764 aaKnown RBP10.1□□□□□ -0.79
CD4-209ENST00000539492 SCYL3Q8IZE3 742 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms