RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
DDB1-214ENST00000539426 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
DDB1-214ENST00000539426 ZFYVE28Q9HCC9 887 aa13.59□□□□□ -0.23
DDB1-214ENST00000539426 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
DDB1-214ENST00000539426 BTBD19C9JJ37 291 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 CIAO1O76071 339 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 INPP5BP32019 993 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 PHKA1P46020 1223 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 NFIAQ12857 509 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 PPIL2Q13356 520 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 ATP2B3Q16720 1220 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 ARHGAP39Q9C0H5 1083 aa13.58□□□□□ -0.24
DDB1-214ENST00000539426 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
DDB1-214ENST00000539426 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
DDB1-214ENST00000539426 DOCK2Q92608 1830 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 CETPP11597 493 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 TCP10Q12799 353 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 DCAF15Q66K64 600 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 FAM151AQ8WW52 585 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 ZNF341Q9BYN7 854 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 CEP126Q9P2H0 1117 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 PTCH2Q9Y6C5 1203 aa13.57□□□□□ -0.24
DDB1-214ENST00000539426 TLR2O60603 784 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 EN2P19622 333 aaPredicted RBP13.56□□□□□ -0.24
DDB1-214ENST00000539426 ADORA1P30542 326 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 SNAPC2Q13487 334 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 HOOK2Q96ED9 719 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 MEIS3Q99687 375 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 ZNF112Q9UJU3 913 aa13.56□□□□□ -0.24
DDB1-214ENST00000539426 LDHBP07195 334 aaKnown RBP13.55□□□□□ -0.24
DDB1-214ENST00000539426 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
DDB1-214ENST00000539426 PPATQ06203 517 aa13.55□□□□□ -0.24
DDB1-214ENST00000539426 ZFPM1Q8IX07 1006 aa13.55□□□□□ -0.24
DDB1-214ENST00000539426 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.55□□□□□ -0.24
DDB1-214ENST00000539426 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
DDB1-214ENST00000539426 ZCCHC17Q9NP64 241 aaKnown RBP13.55□□□□□ -0.24
DDB1-214ENST00000539426 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
DDB1-214ENST00000539426 PTPRFP10586 1907 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
DDB1-214ENST00000539426 LACTBP83111 547 aaPredicted RBP13.54□□□□□ -0.24
DDB1-214ENST00000539426 SLC9C1Q4G0N8 1177 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 COPRSQ9NQ92 184 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 GNL3LQ9NVN8 582 aaKnown RBP13.54□□□□□ -0.24
DDB1-214ENST00000539426 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 ADGRA2Q96PE1 1338 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 RFX7Q2KHR2 1363 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
DDB1-214ENST00000539426 SEMA3EO15041 775 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
DDB1-214ENST00000539426 CTGFP29279 349 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 RARSP54136 660 aaKnown RBP13.53□□□□□ -0.24
DDB1-214ENST00000539426 MOGSQ13724 837 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 RASGRF1Q13972 1273 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 NOL9Q5SY16 702 aaKnown RBP13.53□□□□□ -0.24
DDB1-214ENST00000539426 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 C17orf99Q6UX52 265 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 MGAMO43451 1857 aa13.53□□□□□ -0.24
DDB1-214ENST00000539426 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.25
DDB1-214ENST00000539426 MYCP01106 439 aaPredicted RBP13.52□□□□□ -0.25
DDB1-214ENST00000539426 SLURP2P0DP57 97 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 RGS3P49796 1198 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 TIMM10P62072 90 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 ANKRD23Q86SG2 305 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
DDB1-214ENST00000539426 GAKO14976 1311 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 PHIPQ8WWQ0 1821 aa13.52□□□□□ -0.25
DDB1-214ENST00000539426 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 DOCK1Q14185 1865 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 PDHXO00330 501 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 ZBTB22O15209 634 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 KIF22Q14807 665 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 IDI2Q9BXS1 227 aa13.51□□□□□ -0.25
DDB1-214ENST00000539426 PDS5AQ29RF7 1337 aaKnown RBP13.5□□□□□ -0.25
DDB1-214ENST00000539426 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 PHF20L1A8MW92 1017 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 TFCP2Q12800 502 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 GPAT2Q6NUI2 795 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
DDB1-214ENST00000539426 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
DDB1-214ENST00000539426 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 DDX4Q9NQI0 724 aaKnown RBP13.5□□□□□ -0.25
DDB1-214ENST00000539426 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 ABCF2Q9UG63 623 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 HDAC5Q9UQL6 1122 aa13.5□□□□□ -0.25
DDB1-214ENST00000539426 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms