RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CYP46A1Q9Y6A2 500 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 ZNF532Q9HCE3 1301 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 FOCADQ5VW36 1801 aa10.5□□□□□ -0.73
DDB1-213ENST00000539332 ESPNB1AK53 854 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 AOC3Q16853 763 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 TMED8Q6PL24 325 aaPredicted RBP10.49□□□□□ -0.73
DDB1-213ENST00000539332 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 GRPEL1Q9HAV7 217 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
DDB1-213ENST00000539332 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 JAG2Q9Y219 1238 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 PSME4Q14997 1843 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 G3V3G9 751 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 RPS6KB1P23443 525 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 AK2P54819 239 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 ALX1Q15699 326 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 PODNQ7Z5L7 613 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 SYT17Q9BSW7 474 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 DBNDD1Q9H9R9 158 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 SALL1Q9NSC2 1324 aa10.49□□□□□ -0.73
DDB1-213ENST00000539332 PPIP5K2O43314 1243 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 CPA1P15085 419 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 COL9A3Q14050 684 aaPredicted RBP10.48□□□□□ -0.73
DDB1-213ENST00000539332 RAB3GAP1Q15042 981 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 BLOC1S2Q6QNY1 142 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 STOX1Q6ZVD7 989 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
DDB1-213ENST00000539332 ZNF277Q9NRM2 450 aaPredicted RBP10.48□□□□□ -0.73
DDB1-213ENST00000539332 PDRG1Q9NUG6 133 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 CTNNA3Q9UI47 895 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 FAM205AQ6ZU69 1335 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 TCHHQ07283 1943 aa10.48□□□□□ -0.73
DDB1-213ENST00000539332 DDX60LQ5H9U9 1706 aaKnown RBP10.48□□□□□ -0.73
DDB1-213ENST00000539332 NFKBIEO00221 500 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 ECE2O60344 883 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 PRDX5P30044 214 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 TERF1P54274 439 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 GTF2IP78347 998 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 ZGPATQ8N5A5 531 aaKnown RBP10.47□□□□□ -0.73
DDB1-213ENST00000539332 MAGEB6Q8N7X4 407 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 AGXT2Q9BYV1 514 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 VPS33BQ9H267 617 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 TAOK3Q9H2K8 898 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
DDB1-213ENST00000539332 RAI14Q9P0K7 980 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 COL4A5P29400 1685 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 FGAP02671 866 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 MFSD14BQ5SR56 506 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
DDB1-213ENST00000539332 FBXL16Q8N461 479 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 ZNF384Q8TF68 577 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 TBC1D22AQ8WUA7 517 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
DDB1-213ENST00000539332 NEK1Q96PY6 1258 aa10.47□□□□□ -0.73
DDB1-213ENST00000539332 SBF1O95248 1867 aa10.46□□□□□ -0.73
DDB1-213ENST00000539332 E7EWF7 191 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 LDHBP07195 334 aaKnown RBP10.46□□□□□ -0.74
DDB1-213ENST00000539332 MECOMQ03112 1051 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 TOB2Q14106 344 aaPredicted RBP10.46□□□□□ -0.74
DDB1-213ENST00000539332 ANKRD1Q15327 319 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 TTLL5Q6EMB2 1281 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 CLEC17AQ6ZS10 378 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 RGS22Q8NE09 1264 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 NSUN4Q96CB9 384 aaKnown RBP10.46□□□□□ -0.74
DDB1-213ENST00000539332 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 KCNQ5Q9NR82 932 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 LTBP3Q9NS15 1303 aa10.46□□□□□ -0.74
DDB1-213ENST00000539332 DICER1Q9UPY3 1922 aaKnown RBP10.46□□□□□ -0.74
DDB1-213ENST00000539332 ECM29Q5VYK3 1845 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 MYH15Q9Y2K3 1946 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 MBD4O95243 580 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 LARGE1O95461 756 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 GNAT2P19087 354 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 CYP7A1P22680 504 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
DDB1-213ENST00000539332 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
DDB1-213ENST00000539332 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 ST3GAL1Q11201 340 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 GRIK5Q16478 980 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 IMMTQ16891 758 aaKnown RBP10.45□□□□□ -0.74
DDB1-213ENST00000539332 STRIP1Q5VSL9 837 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 CERS5Q8N5B7 392 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 ANP32BQ92688 251 aaKnown RBP10.45□□□□□ -0.74
DDB1-213ENST00000539332 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 MAP7D2Q96T17 732 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
DDB1-213ENST00000539332 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
DDB1-213ENST00000539332 YDJCA8MPS7 323 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 RAD21O60216 631 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 NUCB2P80303 420 aa10.44□□□□□ -0.74
DDB1-213ENST00000539332 NAA16Q6N069 864 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms