RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 CORO1BQ9BR76 489 aa8.31□□□□□ -1.08
PTPRO-207ENST00000538907 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
PTPRO-207ENST00000538907 KIAA0319Q5VV43 1072 aa8.3□□□□□ -1.08
PTPRO-207ENST00000538907 ABL1P00519 1130 aa8.29□□□□□ -1.08
PTPRO-207ENST00000538907 ZNF124Q15973 351 aa8.29□□□□□ -1.08
PTPRO-207ENST00000538907 PLD6Q8N2A8 252 aaKnown RBP8.29□□□□□ -1.08
PTPRO-207ENST00000538907 FAM181AQ8N9Y4 354 aa8.29□□□□□ -1.08
PTPRO-207ENST00000538907 TMPRSS2O15393 492 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 CD8BP10966 210 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 LIG1P18858 919 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 ITPKAP23677 461 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 CD96P40200 585 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 ECM1Q16610 540 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 HP1BP3Q5SSJ5 553 aaPredicted RBP8.28□□□□□ -1.08
PTPRO-207ENST00000538907 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
PTPRO-207ENST00000538907 PDE3AQ14432 1141 aa8.27□□□□□ -1.09
PTPRO-207ENST00000538907 GLIS3Q8NEA6 775 aa8.27□□□□□ -1.09
PTPRO-207ENST00000538907 CCDC86Q9H6F5 360 aaKnown RBP8.27□□□□□ -1.09
PTPRO-207ENST00000538907 MBNL3Q9NUK0 354 aaKnown RBP8.27□□□□□ -1.09
PTPRO-207ENST00000538907 RNASE1P07998 156 aaKnown RBP8.26□□□□□ -1.09
PTPRO-207ENST00000538907 FAM87AP0C7U9 286 aa8.26□□□□□ -1.09
PTPRO-207ENST00000538907 STK11IPQ8N1F8 1099 aa8.26□□□□□ -1.09
PTPRO-207ENST00000538907 ZC3H12CQ9C0D7 883 aaKnown RBP8.26□□□□□ -1.09
PTPRO-207ENST00000538907 ZFYVE1Q9HBF4 777 aa8.26□□□□□ -1.09
PTPRO-207ENST00000538907 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
PTPRO-207ENST00000538907 ZNF862O60290 1169 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 FUT4P22083 530 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
PTPRO-207ENST00000538907 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 ORC1Q13415 861 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 NPHS2Q9NP85 383 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 SYNGAP1Q96PV0 1343 aa8.25□□□□□ -1.09
PTPRO-207ENST00000538907 LEFTY1O75610 366 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 NETO1Q8TDF5 533 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 EHD4Q9H223 541 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 DISC1Q9NRI5 854 aa8.24□□□□□ -1.09
PTPRO-207ENST00000538907 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
PTPRO-207ENST00000538907 MISP3Q96FF7 219 aa8.23□□□□□ -1.09
PTPRO-207ENST00000538907 RC3H2Q9HBD1 1191 aaKnown RBP8.23□□□□□ -1.09
PTPRO-207ENST00000538907 PCDHGC5Q9Y5F6 944 aa8.23□□□□□ -1.09
PTPRO-207ENST00000538907 ICMTO60725 284 aa8.22□□□□□ -1.09
PTPRO-207ENST00000538907 AP3B2Q13367 1082 aa8.22□□□□□ -1.09
PTPRO-207ENST00000538907 ATG4DQ86TL0 474 aaPredicted RBP8.22□□□□□ -1.09
PTPRO-207ENST00000538907 LRRN4CLQ8ND94 238 aa8.22□□□□□ -1.09
PTPRO-207ENST00000538907 FAM168AQ92567 244 aa8.22□□□□□ -1.09
PTPRO-207ENST00000538907 PLAGL2Q9UPG8 496 aa8.22□□□□□ -1.09
PTPRO-207ENST00000538907 BIN1O00499 593 aa8.21□□□□□ -1.1
PTPRO-207ENST00000538907 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
PTPRO-207ENST00000538907 SPOCD1Q6ZMY3 1216 aa8.21□□□□□ -1.1
PTPRO-207ENST00000538907 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
PTPRO-207ENST00000538907 DBX1A6NMT0 343 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 OXCT1P55809 520 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 ID3Q02535 119 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 PRKCQQ04759 706 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 TTLL4Q14679 1199 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 SMYD4Q8IYR2 804 aaPredicted RBP8.2□□□□□ -1.1
PTPRO-207ENST00000538907 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 KRTAP4-2Q9BYR5 136 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 BRPF3Q9ULD4 1205 aa8.2□□□□□ -1.1
PTPRO-207ENST00000538907 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 CPNE3O75131 537 aaKnown RBP8.19□□□□□ -1.1
PTPRO-207ENST00000538907 IGHA2P01877 340 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 ARHGAP4P98171 946 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 KIF4BQ2VIQ3 1234 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 ATXN3LQ9H3M9 355 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 PIDD1Q9HB75 910 aa8.19□□□□□ -1.1
PTPRO-207ENST00000538907 FARP2O94887 1054 aaPredicted RBP8.18□□□□□ -1.1
PTPRO-207ENST00000538907 NEFMP07197 916 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 HCLS1P14317 486 aaPredicted RBP8.18□□□□□ -1.1
PTPRO-207ENST00000538907 SERPINB4P48594 390 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 AOC3Q16853 763 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 FBLN7Q53RD9 439 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
PTPRO-207ENST00000538907 PI4K2BQ8TCG2 481 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 DUSP23Q9BVJ7 150 aa8.18□□□□□ -1.1
PTPRO-207ENST00000538907 RNGTTO60942 597 aaKnown RBP8.17□□□□□ -1.1
PTPRO-207ENST00000538907 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
PTPRO-207ENST00000538907 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
PTPRO-207ENST00000538907 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
PTPRO-207ENST00000538907 EGFL7Q9UHF1 273 aa8.17□□□□□ -1.1
PTPRO-207ENST00000538907 H3BRB1 525 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
PTPRO-207ENST00000538907 SLFN14P0C7P3 912 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 MESP2Q0VG99 397 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 IFI16Q16666 785 aaKnown RBP8.16□□□□□ -1.1
PTPRO-207ENST00000538907 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 STK35Q8TDR2 534 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 TUT1Q9H6E5 874 aaKnown RBP8.16□□□□□ -1.1
PTPRO-207ENST00000538907 PRDM7Q9NQW5 492 aa8.16□□□□□ -1.1
PTPRO-207ENST00000538907 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRO-207ENST00000538907 EIF1AYO14602 144 aaKnown RBP8.15□□□□□ -1.1
PTPRO-207ENST00000538907 CEACAM5P06731 702 aa8.15□□□□□ -1.1
PTPRO-207ENST00000538907 NEFLP07196 543 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms