RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ABCF2Q9UG63 623 aa18.49■□□□□ 0.55
RAB40B-202ENST00000538809 UNCXA6NJT0 531 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 TCP10Q12799 353 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 VGLL4Q14135 290 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 FKBP1CQ5VVH2 108 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
RAB40B-202ENST00000538809 DZIP1Q86YF9 867 aaKnown RBP18.48■□□□□ 0.55
RAB40B-202ENST00000538809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.48■□□□□ 0.55
RAB40B-202ENST00000538809 PANK1Q8TE04 598 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 OPTNQ96CV9 577 aa18.48■□□□□ 0.55
RAB40B-202ENST00000538809 PDS5AQ29RF7 1337 aaKnown RBP18.48■□□□□ 0.55
RAB40B-202ENST00000538809 FOCADQ5VW36 1801 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 ATAD5Q96QE3 1844 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
RAB40B-202ENST00000538809 ATP8B2P98198 1209 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 NFIAQ12857 509 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-202ENST00000538809 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
RAB40B-202ENST00000538809 ZNF296Q8WUU4 475 aaPredicted RBP18.47■□□□□ 0.55
RAB40B-202ENST00000538809 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 DOCK1Q14185 1865 aa18.47■□□□□ 0.55
RAB40B-202ENST00000538809 WRNIP1Q96S55 665 aa18.46■□□□□ 0.55
RAB40B-202ENST00000538809 USP40Q9NVE5 1235 aa18.46■□□□□ 0.55
RAB40B-202ENST00000538809 CSADQ9Y600 493 aa18.46■□□□□ 0.55
RAB40B-202ENST00000538809 PTPRFP10586 1907 aa18.46■□□□□ 0.55
RAB40B-202ENST00000538809 GPR25O00155 361 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 MAP3K9P80192 1104 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 CTU1Q7Z7A3 348 aaKnown RBP18.45■□□□□ 0.54
RAB40B-202ENST00000538809 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 HMG20BQ9P0W2 317 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 FAM198AQ9UFP1 575 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 GAKO14976 1311 aa18.45■□□□□ 0.54
RAB40B-202ENST00000538809 ZSWIM8A7E2V4 1837 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 PHIPQ8WWQ0 1821 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 RFX7Q2KHR2 1363 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
RAB40B-202ENST00000538809 ARID4AP29374 1257 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-202ENST00000538809 DCAF15Q66K64 600 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 MIGA2Q7L4E1 593 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 SPATA5Q8NB90 893 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 ZKSCAN4Q969J2 545 aaPredicted RBP18.44■□□□□ 0.54
RAB40B-202ENST00000538809 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
RAB40B-202ENST00000538809 ALDH1A1P00352 501 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 MCAMP43121 646 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 BTDP43251 543 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 INHBEP58166 350 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 TNNI3KQ59H18 835 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-202ENST00000538809 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 DBNDD2Q9BQY9 259 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 CFHR5Q9BXR6 569 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 FPGT-TNNI3KV9GXZ4 949 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
RAB40B-202ENST00000538809 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 RGS3P49796 1198 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 MECOMQ03112 1051 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 CEP85Q6P2H3 762 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 PTPN18Q99952 460 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
RAB40B-202ENST00000538809 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
RAB40B-202ENST00000538809 SPDYE5A6NIY4 337 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 FKTNO75072 461 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 UQCRFS1P1P0C7P4 283 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 MS4A1P11836 297 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 INPP5BP32019 993 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 SLF2Q8IX21 1173 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 SNRKQ9NRH2 765 aa18.41■□□□□ 0.54
RAB40B-202ENST00000538809 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 TESPA1A2RU30 521 aaPredicted RBP18.4■□□□□ 0.54
RAB40B-202ENST00000538809 CRHR2Q13324 411 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 PICALMQ13492 652 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 CCL15Q16663 113 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
RAB40B-202ENST00000538809 BRI3BPQ8WY22 251 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
RAB40B-202ENST00000538809 TLR7Q9NYK1 1049 aaKnown RBP18.4■□□□□ 0.54
RAB40B-202ENST00000538809 RAI14Q9P0K7 980 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 MYH1P12882 1939 aa18.4■□□□□ 0.54
RAB40B-202ENST00000538809 OTUD7BQ6GQQ9 843 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 ERO1BQ86YB8 467 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 NSUN4Q96CB9 384 aaKnown RBP18.39■□□□□ 0.53
RAB40B-202ENST00000538809 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.53
RAB40B-202ENST00000538809 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 EXOC6BQ9Y2D4 811 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
RAB40B-202ENST00000538809 WDHD1O75717 1129 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms