RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 HIP1RO75146 1068 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 RPS6KB1P23443 525 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 ERCC5P28715 1186 aaPredicted RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 DTHD1Q6ZMT9 781 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 SMARCC2Q8TAQ2 1214 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 P3H4Q92791 437 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 MARCKSP29966 332 aaPredicted RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 ASIC2Q16515 512 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 CCDC65Q8IXS2 484 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 ARHGEF2Q92974 986 aaKnown RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 RUNDC3BQ96NL0 473 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 CAPN7Q9Y6W3 813 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 I3L4J1 428 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 FAM13AO94988 1023 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 HLA-DOAP06340 250 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 IL15P40933 162 aaPredicted RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 NMIQ13287 307 aaPredicted RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 MUM1Q2TAK8 710 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 HVCN1Q96D96 273 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 CAPS2Q9BXY5 557 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 FAM169AQ9Y6X4 670 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 TRIM37O94972 964 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 GAS8O95995 478 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 GNA11P29992 359 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
SORT1-209ENST00000538502 NOC4LQ9BVI4 516 aaKnown RBP7.74□□□□□ -1.17
SORT1-209ENST00000538502 LRRD1A4D1F6 860 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 TRIM4Q9C037 500 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 ODF2LQ9ULJ1 636 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 RNF113AO15541 343 aaKnown RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 CALUO43852 315 aaPredicted RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 TROVE2P10155 538 aaKnown RBP eCLIP7.73□□□□□ -1.17
SORT1-209ENST00000538502 EPB41P11171 864 aaKnown RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 DENND2CQ68D51 928 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 CEP85Q6P2H3 762 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 PPP2R5BQ15173 497 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 SLC9C1Q4G0N8 1177 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 CCDC82Q8N4S0 544 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 PPP1R12CQ9BZL4 782 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 VEZTQ9HBM0 779 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 CTNND2Q9UQB3 1225 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 CDK13Q14004 1512 aaKnown RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 KIAA0586Q9BVV6 1533 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 IGSF3O75054 1194 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 INF2Q27J81 1249 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 HHATQ5VTY9 493 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 SMC1BQ8NDV3 1235 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 TMOD3Q9NYL9 352 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 CETN3O15182 167 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 EEF2P13639 858 aaKnown RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 ZNF131P52739 623 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 PAK1Q13153 545 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 SLMAPQ14BN4 828 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 SV2BQ7L1I2 683 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 TRIM58Q8NG06 486 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 ACTR5Q9H9F9 607 aaPredicted RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
SORT1-209ENST00000538502 HOMER3Q9NSC5 361 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 MRC2Q9UBG0 1479 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 RNF123Q5XPI4 1314 aa7.73□□□□□ -1.17
SORT1-209ENST00000538502 ANO1Q5XXA6 986 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 MRFAP1L1Q96HT8 127 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 MIS18AQ9NYP9 233 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 UHRF1BP1Q6BDS2 1440 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 POGZQ7Z3K3 1410 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 A0A087WUV0 522 aaPredicted RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 RNASELQ05823 741 aaKnown RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 CCDC25Q86WR0 208 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 TMEM87BQ96K49 555 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 MAK16Q9BXY0 300 aaKnown RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 PAG1Q9NWQ8 432 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 MYO1AQ9UBC5 1043 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 SMIM23A6NLE4 172 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 GNGT1P63211 74 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 MIER3Q7Z3K6 550 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 LEO1Q8WVC0 666 aaPredicted RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 RABGGTAQ92696 567 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 KLHL14Q9P2G3 628 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 TMEM110-MUSTN1A8MSY1 372 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 GNA14O95837 355 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 LIN9Q5TKA1 542 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 SRGAP1Q7Z6B7 1085 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 TSPYL2Q9H2G4 693 aaPredicted RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 SAR1BQ9Y6B6 198 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 DNAJC8O75937 253 aaPredicted RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 SNX16P57768 344 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
SORT1-209ENST00000538502 FRMD4BQ9Y2L6 1034 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 PHLPP2Q6ZVD8 1323 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 TBC1D8BQ0IIM8 1120 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 RIPOR2Q9Y4F9 1068 aa7.72□□□□□ -1.17
SORT1-209ENST00000538502 TOPBP1Q92547 1522 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms