RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 FMR1NBQ8N0W7 255 aaPredicted RBP28.99■■■□□ 2.23
RAB40C-204ENST00000538492 ALG1Q9BT22 464 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 POLR3EQ9NVU0 708 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 IQSEC3Q9UPP2 1182 aaPredicted RBP28.99■■■□□ 2.23
RAB40C-204ENST00000538492 TPM3P06753 285 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 NDUFA8P51970 172 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 TMEM67Q5HYA8 995 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 PLA2G4DQ86XP0 818 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 FBXW7Q969H0 707 aa28.99■■■□□ 2.23
RAB40C-204ENST00000538492 DOCK2Q92608 1830 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 KCNQ2O43526 872 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 IQCB1Q15051 598 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 ALX1Q15699 326 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 TMEM87BQ96K49 555 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 LY9Q9HBG7 655 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 NRBP1Q9UHY1 535 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 TACC3Q9Y6A5 838 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 SPTLC2O15270 562 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 CAVIN2O95810 425 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 CHRNDQ07001 517 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 KCNG4Q8TDN1 519 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 ZSWIM5Q9P217 1185 aa28.98■■■□□ 2.23
RAB40C-204ENST00000538492 GSG1L2A8MUP6 293 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 GOLGA6L19H0YKK7 550 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 ZBTB43O43298 467 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 STK11IPQ8N1F8 1099 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 LCORLQ8N3X6 602 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 KIAA1524Q8TCG1 905 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 CCDC186Q7Z3E2 898 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 MIGA1Q8NAN2 632 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 SDF4Q9BRK5 362 aa28.97■■■□□ 2.23
RAB40C-204ENST00000538492 YEATS4O95619 227 aa28.96■■■□□ 2.23
RAB40C-204ENST00000538492 CHD4Q14839 1912 aa28.96■■■□□ 2.23
RAB40C-204ENST00000538492 CDKL5O76039 1030 aa28.96■■■□□ 2.23
RAB40C-204ENST00000538492 SPTLC3Q9NUV7 552 aa28.96■■■□□ 2.23
RAB40C-204ENST00000538492 NRAPQ86VF7 1730 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 A0A1W2PQ27 194 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 A0A1W2PQ64 194 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 A0A1W2PQD8 194 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 RRP12Q5JTH9 1297 aaKnown RBP28.95■■■□□ 2.23
RAB40C-204ENST00000538492 LRP2BPQ9P2M1 347 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 SLC4A4Q9Y6R1 1079 aa28.95■■■□□ 2.23
RAB40C-204ENST00000538492 COL4A1P02462 1669 aa28.95■■■□□ 2.22
RAB40C-204ENST00000538492 GOLGA8AA7E2F4 631 aa28.95■■■□□ 2.22
RAB40C-204ENST00000538492 IFIT3O14879 490 aaKnown RBP28.95■■■□□ 2.22
RAB40C-204ENST00000538492 ANO1Q5XXA6 986 aa28.95■■■□□ 2.22
RAB40C-204ENST00000538492 TOMM22Q9NS69 142 aa28.95■■■□□ 2.22
RAB40C-204ENST00000538492 TDO2P48775 406 aa28.94■■■□□ 2.22
RAB40C-204ENST00000538492 KRT40Q6A162 431 aa28.94■■■□□ 2.22
RAB40C-204ENST00000538492 CPLX2Q6PUV4 134 aaKnown RBP28.94■■■□□ 2.22
RAB40C-204ENST00000538492 UBE2Q2LH0YL09 131 aa28.94■■■□□ 2.22
RAB40C-204ENST00000538492 AKNAD1Q5T1N1 836 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 VPS37DQ86XT2 251 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 ZKSCAN3Q9BRR0 538 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 SPATA31A5Q5VU36 1347 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 SPATA31A7Q8IWB4 1347 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 WTIPA6NIX2 430 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-204ENST00000538492 RANBP6O60518 1105 aaKnown RBP28.93■■■□□ 2.22
RAB40C-204ENST00000538492 NTRK3Q16288 839 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 MFSD6Q6ZSS7 791 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 SGMS1Q86VZ5 419 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 FAM217BQ9NTX9 383 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-204ENST00000538492 ANO10Q9NW15 660 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 SLC12A7Q9Y666 1083 aa28.93■■■□□ 2.22
RAB40C-204ENST00000538492 BECN2A8MW95 431 aa28.92■■■□□ 2.22
RAB40C-204ENST00000538492 MARCKSP29966 332 aaPredicted RBP28.92■■■□□ 2.22
RAB40C-204ENST00000538492 IARSP41252 1262 aaKnown RBP28.92■■■□□ 2.22
RAB40C-204ENST00000538492 KCNQ4P56696 695 aa28.92■■■□□ 2.22
RAB40C-204ENST00000538492 LRMPQ12912 555 aa28.92■■■□□ 2.22
RAB40C-204ENST00000538492 CLIP2Q9UDT6 1046 aa28.92■■■□□ 2.22
RAB40C-204ENST00000538492 GNL2Q13823 731 aaKnown RBP28.92■■■□□ 2.22
RAB40C-204ENST00000538492 HSP90AA2PQ14568 343 aaPredicted RBP28.92■■■□□ 2.22
RAB40C-204ENST00000538492 CCDC69A6NI79 296 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 RBM10P98175 930 aaKnown RBP28.91■■■□□ 2.22
RAB40C-204ENST00000538492 RREB1Q92766 1687 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 RTL9Q8NET4 1388 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 C3orf67Q6ZVT6 689 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 NACAP1Q9BZK3 213 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 ABCF2Q9UG63 623 aa28.91■■■□□ 2.22
RAB40C-204ENST00000538492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.9■■■□□ 2.22
RAB40C-204ENST00000538492 DHX40Q8IX18 779 aaKnown RBP28.9■■■□□ 2.22
RAB40C-204ENST00000538492 CNNM2Q9H8M5 875 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 ZNF652Q9Y2D9 606 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 TAF1P21675 1872 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 ECM29Q5VYK3 1845 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 LIFRP42702 1097 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 ERFEQ4G0M1 354 aa28.9■■■□□ 2.22
RAB40C-204ENST00000538492 GYG1P46976 350 aa28.89■■■□□ 2.22
RAB40C-204ENST00000538492 AXDND1Q5T1B0 1012 aaPredicted RBP28.89■■■□□ 2.22
RAB40C-204ENST00000538492 ADGRA1Q86SQ6 560 aa28.89■■■□□ 2.22
RAB40C-204ENST00000538492 SLC26A6Q9BXS9 759 aa28.89■■■□□ 2.22
RAB40C-204ENST00000538492 WDHD1O75717 1129 aaPredicted RBP28.89■■■□□ 2.21
RAB40C-204ENST00000538492 CDC5LQ99459 802 aaKnown RBP28.89■■■□□ 2.21
RAB40C-204ENST00000538492 KRT23Q9C075 422 aa28.89■■■□□ 2.21
RAB40C-204ENST00000538492 BICDL1Q6ZP65 573 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 SMIM5Q71RC9 77 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 CEP57L1Q8IYX8 460 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 PNPLA7Q6ZV29 1317 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 GNAT2P19087 354 aa28.88■■■□□ 2.21
RAB40C-204ENST00000538492 CYP7A1P22680 504 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms