RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KIF22Q14807 665 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 ERFEQ4G0M1 354 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 MYL10Q9BUA6 226 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 BRPF3Q9ULD4 1205 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 INSRP06213 1382 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 N4BP3O15049 544 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 GJC1P36383 396 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 CHRNDQ07001 517 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 GIMAP6Q6P9H5 292 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 LUZP1Q86V48 1076 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 AS3MTQ9HBK9 375 aa6.09□□□□□ -1.44
LRP6-203ENST00000538239 TRMT1Q9NXH9 659 aaKnown RBP6.09□□□□□ -1.44
LRP6-203ENST00000538239 CLRN2A0PK11 232 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 CCDC169A6NNP5 214 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 ZSCAN12O43309 604 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 ERLIN1O75477 346 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 PIK3AP1Q6ZUJ8 805 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 MAP3K4Q9Y6R4 1608 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 TMEM110-MUSTN1A8MSY1 372 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 UBE2HP62256 183 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 KIF4BQ2VIQ3 1234 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 USP25Q9UHP3 1055 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 ZBTB1Q9Y2K1 713 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 KDRP35968 1356 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 SLC27A2O14975 620 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 CFBP00751 764 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 CCT6AP40227 531 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 ARID5AQ03989 594 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 TNFAIP1Q13829 316 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 NCAPH2Q6IBW4 605 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 ARHGEF25Q86VW2 580 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 FRMPD2Q68DX3 1309 aaPredicted RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 VWA3AA6NCI4 1184 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 DBNDD1Q9H9R9 158 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 RAD50Q92878 1312 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 MRPS27Q92552 414 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 GREM2Q9H772 168 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 SRP68Q9UHB9 627 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 V9GY48 417 aaPredicted RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 MBD5Q9P267 1494 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 SPTLC2O15270 562 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 MKRN3Q13064 507 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 SPOUT1Q5T280 376 aaKnown RBP6.08□□□□□ -1.44
LRP6-203ENST00000538239 RTL1A6NKG5 1358 aa6.08□□□□□ -1.44
LRP6-203ENST00000538239 PRAMEF22A3QJZ6 481 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 BTDP43251 543 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 CERS3Q8IU89 383 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 ALS2CR12Q96Q35 445 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 MAP7D2Q96T17 732 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 TSPYL1Q9H0U9 437 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 RBM10P98175 930 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 TFAP4Q01664 338 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 LRRC24Q50LG9 513 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 HOOK3Q86VS8 718 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 SPAG5Q96R06 1193 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 DNAJC5Q9H3Z4 198 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 hCG_1642624A0A1W2PR95 340 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 H0YHG0 523 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 F13A1P00488 732 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 RPS6KB1P23443 525 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 DHX37Q8IY37 1157 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 PSMA7O14818 248 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 FAM47CQ5HY64 1035 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 NAP1L4Q99733 375 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 USP6P35125 1406 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 CDC42BPGQ6DT37 1551 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 URI1O94763 535 aaPredicted RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 CCDC172P0C7W6 258 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 TERF1P54274 439 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 DCAF17Q5H9S7 520 aaPredicted RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 NCAPG2Q86XI2 1143 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 SDR42E1Q8WUS8 393 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 CCDC102AQ96A19 550 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 TRIM6Q9C030 488 aaPredicted RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 AZI2Q9H6S1 392 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 NCOA5Q9HCD5 579 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 ZMYM4Q5VZL5 1548 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 ZNF804BA4D1E1 1349 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 TXKP42681 527 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 ADCY7P51828 1080 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 STX17P56962 302 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 PTPN14Q15678 1187 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 DALRD3Q5D0E6 543 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 EDC3Q96F86 508 aaKnown RBP6.07□□□□□ -1.44
LRP6-203ENST00000538239 ADGRL3Q9HAR2 1447 aa6.07□□□□□ -1.44
LRP6-203ENST00000538239 PROSER3Q2NL68 480 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 APBB1IPQ7Z5R6 666 aaPredicted RBP6.06□□□□□ -1.44
LRP6-203ENST00000538239 TMEM87BQ96K49 555 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ZNF165P49910 485 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 PPARAQ07869 468 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 ANO6Q4KMQ2 910 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 DCAF15Q66K64 600 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 LRSAM1Q6UWE0 723 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 FERMT1Q9BQL6 677 aa6.06□□□□□ -1.44
LRP6-203ENST00000538239 BCCIPQ9P287 314 aaKnown RBP eCLIP6.06□□□□□ -1.44
LRP6-203ENST00000538239 ABCC3O15438 1527 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms