RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 ATG9AQ7Z3C6 839 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC170-202ENST00000537358 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 R3HDMLQ9H3Y0 253 aa12.2□□□□□ -0.46
CCDC170-202ENST00000537358 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
CCDC170-202ENST00000537358 CCL15-CCL14A0A0B4J2E2 113 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
CCDC170-202ENST00000537358 GJA5P36382 358 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 SP3Q02447 781 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 CRHR2Q13324 411 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 CCL15Q16663 113 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 APOBEC3HQ6NTF7 200 aaKnown RBP12.19□□□□□ -0.46
CCDC170-202ENST00000537358 ERO1BQ86YB8 467 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
CCDC170-202ENST00000537358 MYH2Q9UKX2 1941 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 CETPP11597 493 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
CCDC170-202ENST00000537358 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
CCDC170-202ENST00000537358 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 FAM151AQ8WW52 585 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 MEIS3Q99687 375 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
CCDC170-202ENST00000537358 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 SNAPC2Q13487 334 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 SPTY2D1Q68D10 685 aaPredicted RBP12.17□□□□□ -0.46
CCDC170-202ENST00000537358 DZIP1Q86YF9 867 aaKnown RBP12.17□□□□□ -0.46
CCDC170-202ENST00000537358 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 PA2G4Q9UQ80 394 aaKnown RBP12.17□□□□□ -0.46
CCDC170-202ENST00000537358 DAGLAQ9Y4D2 1042 aa12.17□□□□□ -0.46
CCDC170-202ENST00000537358 PRDX5P30044 214 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 PHKA1P46020 1223 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 TCP10Q12799 353 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 PPIL2Q13356 520 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
CCDC170-202ENST00000537358 KIF22Q14807 665 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 GORABQ5T7V8 394 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
CCDC170-202ENST00000537358 PTPN18Q99952 460 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
CCDC170-202ENST00000537358 USP40Q9NVE5 1235 aa12.16□□□□□ -0.46
CCDC170-202ENST00000537358 GNAI2P04899 355 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 PPATQ06203 517 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 ATF7IPQ6VMQ6 1270 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 MIGA2Q7L4E1 593 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CCDC170-202ENST00000537358 ZKSCAN4Q969J2 545 aaPredicted RBP12.15□□□□□ -0.46
CCDC170-202ENST00000537358 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 SNCAIPQ9Y6H5 919 aa12.15□□□□□ -0.46
CCDC170-202ENST00000537358 TNRC18O15417 2968 aaPredicted RBP12.15□□□□□ -0.47
CCDC170-202ENST00000537358 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
CCDC170-202ENST00000537358 DOCK2Q92608 1830 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 TRIM27P14373 513 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 TIMM10P62072 90 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC170-202ENST00000537358 MTX1Q13505 466 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 NBPF11Q86T75 865 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
CCDC170-202ENST00000537358 NEUROD6Q96NK8 337 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
CCDC170-202ENST00000537358 IRF6O14896 467 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 ADORA1P30542 326 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 TFCP2Q12800 502 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 XAGE2Q96GT9 111 aa12.13□□□□□ -0.47
CCDC170-202ENST00000537358 TLR2O60603 784 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 ENTPD3O75355 529 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 LDHCP07864 332 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 INPP5BP32019 993 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 GSTO1P78417 241 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 NFIAQ12857 509 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
CCDC170-202ENST00000537358 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.12□□□□□ -0.47
CCDC170-202ENST00000537358 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 TMEM106CQ9BVX2 250 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
CCDC170-202ENST00000537358 GAKO14976 1311 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 BCAR3O75815 825 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 GNRH1P01148 92 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 RGS3P49796 1198 aa12.11□□□□□ -0.47
CCDC170-202ENST00000537358 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
CCDC170-202ENST00000537358 SLC9C1Q4G0N8 1177 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms