RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
POLE-210	ENST00000537064	IQGAP1	P46940	1657 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	CCDC113	Q9H0I3	377 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	DDIT3	P35638	169 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	PAK2	Q13177	524 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	FBXO38	Q6PIJ6	1188 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	PLA2G4D	Q86XP0	818 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	TMEM87B	Q96K49	555 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	ATP5D	P30049	168 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	KIAA0753	Q2KHM9	967 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	CLCN6	P51797	869 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	MTMR3	Q13615	1198 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	FBXO18	Q8NFZ0	1043 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	BPIFA3	Q9BQP9	254 aa		12.08	□□□□□ -0.48
POLE-210	ENST00000537064	IDE	P14735	1019 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	WDR66	Q8TBY9	1149 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	SCLT1	Q96NL6	688 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	NAP1L3	Q99457	506 aa	Predicted RBP	12.07	□□□□□ -0.48
POLE-210	ENST00000537064	CMA1	P23946	247 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	CDC23	Q9UJX2	597 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	JRKL	Q9Y4A0	524 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	SLC5A1	P13866	664 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	MATR3	P43243	847 aa	Known RBP eCLIP	12.07	□□□□□ -0.48	1e-7	■■■■□ 26.2
POLE-210	ENST00000537064	DDX46	Q7L014	1031 aa	Known RBP	12.07	□□□□□ -0.48
POLE-210	ENST00000537064	LSG1	Q9H089	658 aa	Known RBP	12.07	□□□□□ -0.48
POLE-210	ENST00000537064	POTEJ	P0CG39	1038 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	DSCC1	Q9BVC3	393 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	ICE2	Q659A1	982 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	C8orf74	Q6P047	294 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	SAR1B	Q9Y6B6	198 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	PFKFB2	O60825	505 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	ATF3	P18847	181 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.07	□□□□□ -0.48
POLE-210	ENST00000537064	POSTN	Q15063	836 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	CEP128	Q6ZU80	1094 aa		12.07	□□□□□ -0.48
POLE-210	ENST00000537064	ATP11A	P98196	1134 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	ATP2B2	Q01814	1243 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	ATP2B3	Q16720	1220 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	PALD1	Q9ULE6	856 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	YEATS2	Q9ULM3	1422 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	DCAF8L1	A6NGE4	600 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	MAP3K9	P80192	1104 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	NAA25	Q14CX7	972 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	HOOK3	Q86VS8	718 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	CCDC26	Q8TAB7	109 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-210	ENST00000537064	LONRF2	Q1L5Z9	754 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	AKAP4	Q5JQC9	854 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.06	□□□□□ -0.48
POLE-210	ENST00000537064	NFE2L3	Q9Y4A8	694 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	CETN1	Q12798	172 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	TRIM7	Q9C029	511 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	RTEL1	Q9NZ71	1219 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	SBNO1	A3KN83	1393 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	ACE	P12821	1306 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	CLNS1A	P54105	237 aa	Known RBP	12.06	□□□□□ -0.48
POLE-210	ENST00000537064	CCDC38	Q502W7	563 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	ARMC9	Q7Z3E5	817 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	UHRF1BP1L	A0JNW5	1464 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	KRT2	P35908	639 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	PLCB1	Q9NQ66	1216 aa		12.06	□□□□□ -0.48
POLE-210	ENST00000537064	ANKRD13D	Q6ZTN6	518 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	FBF1	Q8TES7	1133 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	CCDC77	Q9BR77	488 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	CAPS2	Q9BXY5	557 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	AFM	P43652	599 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	UBE3B	Q7Z3V4	1068 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	ESR2	Q92731	530 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	LRRC2	Q9BYS8	371 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	NUCKS1	Q9H1E3	243 aa	Known RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	GNAQ	P50148	359 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	CCDC40	Q4G0X9	1142 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	RNF216	Q9NWF9	866 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	STRN4	Q9NRL3	753 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	PNMA6E	A0A0J9YXQ4	647 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	KIF1C	O43896	1103 aa	Known RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	IGHMBP2	P38935	993 aa	Known RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	NOP2	P46087	812 aa	Known RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	HNRNPH2	P55795	449 aa	Known RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	MTX1	Q13505	466 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	LMNTD2	Q8IXW0	634 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	TRIM58	Q8NG06	486 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	FERMT2	Q96AC1	680 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	CAPZA3	Q96KX2	299 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	HAUS4	Q9H6D7	363 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	VWA3B	Q502W6	1294 aa		12.05	□□□□□ -0.48
POLE-210	ENST00000537064	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.05	□□□□□ -0.48
POLE-210	ENST00000537064	SNRPA1	P09661	255 aa	Known RBP	12.04	□□□□□ -0.48
POLE-210	ENST00000537064	MTHFSD	Q2M296	383 aa	Known RBP	12.04	□□□□□ -0.48
POLE-210	ENST00000537064	SMARCC2	Q8TAQ2	1214 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	MTRF1L	Q9UGC7	380 aa	Known RBP	12.04	□□□□□ -0.48
POLE-210	ENST00000537064	RNF17	Q9BXT8	1623 aa	Known RBP	12.04	□□□□□ -0.48
POLE-210	ENST00000537064	STARD3NL	O95772	234 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	KIF2C	Q99661	725 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.04	□□□□□ -0.48
POLE-210	ENST00000537064	POLR3E	Q9NVU0	708 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	CPA1	P15085	419 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	CFAP221	Q4G0U5	840 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	NBPF14	Q5TI25	921 aa		12.04	□□□□□ -0.48
POLE-210	ENST00000537064	SECISBP2L	Q93073	1101 aa	Known RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms