RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PRNPP04156 253 aa10.38□□□□□ -0.75
CCDC7-208ENST00000537047 LIG1P18858 919 aa10.38□□□□□ -0.75
CCDC7-208ENST00000537047 SEZ6L2Q6UXD5 910 aa10.38□□□□□ -0.75
CCDC7-208ENST00000537047 METTL22Q9BUU2 404 aaPredicted RBP10.38□□□□□ -0.75
CCDC7-208ENST00000537047 GSX1Q9H4S2 264 aaPredicted RBP10.38□□□□□ -0.75
CCDC7-208ENST00000537047 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
CCDC7-208ENST00000537047 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
CCDC7-208ENST00000537047 ANGEL1Q9UNK9 670 aaKnown RBP10.38□□□□□ -0.75
CCDC7-208ENST00000537047 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
CCDC7-208ENST00000537047 EIF4EBP3O60516 100 aaPredicted RBP10.37□□□□□ -0.75
CCDC7-208ENST00000537047 COL19A1Q14993 1142 aa10.37□□□□□ -0.75
CCDC7-208ENST00000537047 PRPF40BQ6NWY9 871 aaKnown RBP10.37□□□□□ -0.75
CCDC7-208ENST00000537047 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
CCDC7-208ENST00000537047 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
CCDC7-208ENST00000537047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.36□□□□□ -0.75
CCDC7-208ENST00000537047 MAP7Q14244 749 aa10.36□□□□□ -0.75
CCDC7-208ENST00000537047 ZC3H7BQ9UGR2 993 aaKnown RBP10.36□□□□□ -0.75
CCDC7-208ENST00000537047 KRTAP4-8A0A0G2JLE6 195 aa10.35□□□□□ -0.75
CCDC7-208ENST00000537047 YBX3P16989 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC7-208ENST00000537047 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
CCDC7-208ENST00000537047 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
CCDC7-208ENST00000537047 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
CCDC7-208ENST00000537047 ZNF862O60290 1169 aa10.34□□□□□ -0.75
CCDC7-208ENST00000537047 PTPN12Q05209 780 aaKnown RBP10.34□□□□□ -0.75
CCDC7-208ENST00000537047 HP1BP3Q5SSJ5 553 aaPredicted RBP10.34□□□□□ -0.75
CCDC7-208ENST00000537047 CBLL1Q75N03 491 aa10.34□□□□□ -0.75
CCDC7-208ENST00000537047 VSIG10LQ86VR7 867 aa10.34□□□□□ -0.75
CCDC7-208ENST00000537047 AP3B2Q13367 1082 aa10.33□□□□□ -0.76
CCDC7-208ENST00000537047 ZFYVE1Q9HBF4 777 aa10.33□□□□□ -0.76
CCDC7-208ENST00000537047 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 FCGRTP55899 365 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 DUSP27Q5VZP5 1158 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 TP53INP2Q8IXH6 220 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 RBCK1Q9BYM8 510 aa10.32□□□□□ -0.76
CCDC7-208ENST00000537047 BSDC1Q9NW68 430 aaPredicted RBP10.32□□□□□ -0.76
CCDC7-208ENST00000537047 CDK5R2Q13319 367 aa10.31□□□□□ -0.76
CCDC7-208ENST00000537047 RPS26P11Q5JNZ5 115 aaPredicted RBP10.31□□□□□ -0.76
CCDC7-208ENST00000537047 STK35Q8TDR2 534 aa10.31□□□□□ -0.76
CCDC7-208ENST00000537047 ALKBH8Q96BT7 664 aaKnown RBP10.31□□□□□ -0.76
CCDC7-208ENST00000537047 FBXL18Q96ME1 805 aa10.31□□□□□ -0.76
CCDC7-208ENST00000537047 CRIM1Q9NZV1 1036 aa10.31□□□□□ -0.76
CCDC7-208ENST00000537047 DTHD1Q6ZMT9 781 aa10.3□□□□□ -0.76
CCDC7-208ENST00000537047 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
CCDC7-208ENST00000537047 DMRTB1Q96MA1 342 aa10.3□□□□□ -0.76
CCDC7-208ENST00000537047 FANCD2OSQ96PS1 177 aa10.3□□□□□ -0.76
CCDC7-208ENST00000537047 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
CCDC7-208ENST00000537047 GSTP1P09211 210 aaKnown RBP10.29□□□□□ -0.76
CCDC7-208ENST00000537047 OGFOD3Q6PK18 319 aa10.29□□□□□ -0.76
CCDC7-208ENST00000537047 FLCNQ8NFG4 579 aa10.29□□□□□ -0.76
CCDC7-208ENST00000537047 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
CCDC7-208ENST00000537047 DISC1Q9NRI5 854 aa10.29□□□□□ -0.76
CCDC7-208ENST00000537047 GPN3Q9UHW5 284 aaPredicted RBP10.29□□□□□ -0.76
CCDC7-208ENST00000537047 PCDHGC5Q9Y5F6 944 aa10.29□□□□□ -0.76
CCDC7-208ENST00000537047 U3KQE9 123 aa10.29□□□□□ -0.76
CCDC7-208ENST00000537047 ZNF574Q6ZN55 896 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-208ENST00000537047 PDZD3Q86UT5 571 aa10.28□□□□□ -0.76
CCDC7-208ENST00000537047 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
CCDC7-208ENST00000537047 CYP27A1Q02318 531 aa10.27□□□□□ -0.77
CCDC7-208ENST00000537047 ID3Q02535 119 aa10.27□□□□□ -0.77
CCDC7-208ENST00000537047 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
CCDC7-208ENST00000537047 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-208ENST00000537047 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 KIF4BQ2VIQ3 1234 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 NXPE4Q6UWF7 544 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 FAM181AQ8N9Y4 354 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 KCNB2Q92953 911 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 SYNGAP1Q96PV0 1343 aa10.26□□□□□ -0.77
CCDC7-208ENST00000537047 FAM87AP0C7U9 286 aa10.25□□□□□ -0.77
CCDC7-208ENST00000537047 HCLS1P14317 486 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-208ENST00000537047 MPRIPQ6WCQ1 1025 aa10.25□□□□□ -0.77
CCDC7-208ENST00000537047 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
CCDC7-208ENST00000537047 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-208ENST00000537047 PIDD1Q9HB75 910 aa10.25□□□□□ -0.77
CCDC7-208ENST00000537047 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
CCDC7-208ENST00000537047 LEFTY1O75610 366 aa10.24□□□□□ -0.77
CCDC7-208ENST00000537047 SLFN14P0C7P3 912 aa10.24□□□□□ -0.77
CCDC7-208ENST00000537047 BNIP3Q12983 259 aa10.24□□□□□ -0.77
CCDC7-208ENST00000537047 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC7-208ENST00000537047 SMYD4Q8IYR2 804 aaPredicted RBP10.24□□□□□ -0.77
CCDC7-208ENST00000537047 TMEM39AQ9NV64 488 aa10.24□□□□□ -0.77
CCDC7-208ENST00000537047 AKAP2Q9Y2D5 859 aa10.24□□□□□ -0.77
CCDC7-208ENST00000537047 PNMA6FA0A0J9YX94 578 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 RNGTTO60942 597 aaKnown RBP10.23□□□□□ -0.77
CCDC7-208ENST00000537047 NEFMP07197 916 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 ITGB5P18084 799 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 DSC3Q14574 896 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 OGFOD2Q6N063 350 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 SULF2Q8IWU5 870 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 PLD6Q8N2A8 252 aaKnown RBP10.23□□□□□ -0.77
CCDC7-208ENST00000537047 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 ATXN3LQ9H3M9 355 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 DCTN4Q9UJW0 460 aa10.23□□□□□ -0.77
CCDC7-208ENST00000537047 KRT82Q9NSB4 513 aa10.22□□□□□ -0.77
CCDC7-208ENST00000537047 PPP2R3AQ06190 1150 aa10.21□□□□□ -0.77
CCDC7-208ENST00000537047 MAP1SQ66K74 1059 aaPredicted RBP10.21□□□□□ -0.77
CCDC7-208ENST00000537047 AGBL5Q8NDL9 886 aa10.21□□□□□ -0.77
CCDC7-208ENST00000537047 MAPK1P28482 360 aa10.2□□□□□ -0.78
CCDC7-208ENST00000537047 CD96P40200 585 aa10.2□□□□□ -0.78
CCDC7-208ENST00000537047 C3orf58Q8NDZ4 430 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms