RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STK36Q9NRP7 1315 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 TCHHQ07283 1943 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 ZBTB43O43298 467 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 TMEM67Q5HYA8 995 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 SPTY2D1Q68D10 685 aaPredicted RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 APOA5Q6Q788 366 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 CERKQ8TCT0 537 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 FAM84BQ96KN1 310 aaPredicted RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 TFIP11Q9UBB9 837 aaKnown RBP15.84■□□□□ 0.13
SMG6-203ENST00000536871 AFF2P51816 1311 aa15.84■□□□□ 0.13
SMG6-203ENST00000536871 B4E1Z4 1266 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 NPHP1O15259 732 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
SMG6-203ENST00000536871 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 RBM43Q6ZSC3 357 aaKnown RBP15.83■□□□□ 0.12
SMG6-203ENST00000536871 LCORLQ8N3X6 602 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 ZMYND15Q9H091 742 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 TNMDQ9H2S6 317 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 LEMD3Q9Y2U8 911 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 SLC12A7Q9Y666 1083 aa15.83■□□□□ 0.12
SMG6-203ENST00000536871 SNAP23O00161 211 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 IFIT3O14879 490 aaKnown RBP15.82■□□□□ 0.12
SMG6-203ENST00000536871 YEATS4O95619 227 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 GYG1P46976 350 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
SMG6-203ENST00000536871 FAM173BQ6P4H8 233 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 CYB5R4Q7L1T6 521 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 KCNG4Q8TDN1 519 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 CLSTN2Q9H4D0 955 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 CCDC39Q9UFE4 941 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 SRP68Q9UHB9 627 aaKnown RBP15.82■□□□□ 0.12
SMG6-203ENST00000536871 C4BP0C0L5 1744 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 ADD1P35611 737 aaKnown RBP15.82■□□□□ 0.12
SMG6-203ENST00000536871 ZSCAN30Q86W11 494 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 CERS3Q8IU89 383 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 ESR2Q92731 530 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 LY9Q9HBG7 655 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 RRAGDQ9NQL2 400 aaPredicted RBP15.82■□□□□ 0.12
SMG6-203ENST00000536871 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 NEDD4P46934 1319 aa15.82■□□□□ 0.12
SMG6-203ENST00000536871 A0A1B0GUL6 1792 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 PPARAQ07869 468 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 TRIM29Q14134 588 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 CCDC73Q6ZRK6 1079 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 FAM196AQ6ZSG2 479 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 SEPT12Q8IYM1 358 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 DACT1Q9NYF0 836 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 ZSWIM5Q9P217 1185 aa15.81■□□□□ 0.12
SMG6-203ENST00000536871 A0A1W2PQ27 194 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 A0A1W2PQ64 194 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 A0A1W2PQD8 194 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 GOLGA8AA7E2F4 631 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 KDM4AO75164 1064 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 GRAPQ13588 217 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 WTAPQ15007 396 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 C15orf52Q6ZUT6 534 aaKnown RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 CNBD1Q8NA66 436 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 RNF214Q8ND24 703 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 GRAPLQ8TC17 118 aaPredicted RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 RIOK1Q9BRS2 568 aaKnown RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 GPHNQ9NQX3 736 aaPredicted RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 SLC3A2P08195 630 aaKnown RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 MSNP26038 577 aaKnown RBP15.8■□□□□ 0.12
SMG6-203ENST00000536871 KCNQ4P56696 695 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
SMG6-203ENST00000536871 TAF1LQ8IZX4 1826 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 IFNAR1P17181 557 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 LIG1P18858 919 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 TM4SF1P30408 202 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 WDR66Q8TBY9 1149 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 FAM200AQ8TCP9 573 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 UBAC1Q9BSL1 405 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 ALG1Q9BT22 464 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
SMG6-203ENST00000536871 ATP8A2Q9NTI2 1148 aa15.79■□□□□ 0.12
SMG6-203ENST00000536871 ST5P78524 1137 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
SMG6-203ENST00000536871 ADALQ6DHV7 355 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 SASS6Q6UVJ0 657 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 MIGA1Q8NAN2 632 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 USP28Q96RU2 1077 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 XDHP47989 1333 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 DTNBO60941 627 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
SMG6-203ENST00000536871 FGRP09769 529 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
SMG6-203ENST00000536871 SF3A1Q15459 793 aaKnown RBP15.78■□□□□ 0.12
SMG6-203ENST00000536871 MYSM1Q5VVJ2 828 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms