RNA–Protein interactions for RNA: ENST00000536613.6

CACNB1-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-205ENST00000536613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
CACNB1-205ENST00000536613 CFHR5Q9BXR6 569 aa22.66■■□□□ 1.22
CACNB1-205ENST00000536613 ELP3Q9H9T3 547 aa22.66■■□□□ 1.22
CACNB1-205ENST00000536613 ALDH1A1P00352 501 aa22.65■■□□□ 1.22
CACNB1-205ENST00000536613 VGLL4Q14135 290 aa22.65■■□□□ 1.22
CACNB1-205ENST00000536613 FAM151AQ8WW52 585 aa22.65■■□□□ 1.22
CACNB1-205ENST00000536613 OPTNQ96CV9 577 aa22.65■■□□□ 1.22
CACNB1-205ENST00000536613 ABCF2Q9UG63 623 aa22.65■■□□□ 1.22
CACNB1-205ENST00000536613 GAKO14976 1311 aa22.64■■□□□ 1.22
CACNB1-205ENST00000536613 OS9Q13438 667 aaPredicted RBP22.64■■□□□ 1.21
CACNB1-205ENST00000536613 NOM1Q5C9Z4 860 aaKnown RBP22.64■■□□□ 1.21
CACNB1-205ENST00000536613 SPTY2D1Q68D10 685 aaPredicted RBP22.64■■□□□ 1.21
CACNB1-205ENST00000536613 DZIP1Q86YF9 867 aaKnown RBP22.64■■□□□ 1.21
CACNB1-205ENST00000536613 IFNL1Q8IU54 200 aa22.64■■□□□ 1.21
CACNB1-205ENST00000536613 PANK1Q8TE04 598 aa22.64■■□□□ 1.21
CACNB1-205ENST00000536613 USP40Q9NVE5 1235 aa22.64■■□□□ 1.21
CACNB1-205ENST00000536613 HMG20BQ9P0W2 317 aa22.64■■□□□ 1.21
CACNB1-205ENST00000536613 CSADQ9Y600 493 aa22.64■■□□□ 1.21
CACNB1-205ENST00000536613 OTOFQ9HC10 1997 aa22.63■■□□□ 1.21
CACNB1-205ENST00000536613 GPR25O00155 361 aa22.63■■□□□ 1.21
CACNB1-205ENST00000536613 NFIAQ12857 509 aa22.63■■□□□ 1.21
CACNB1-205ENST00000536613 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
CACNB1-205ENST00000536613 ZNF296Q8WUU4 475 aaPredicted RBP22.63■■□□□ 1.21
CACNB1-205ENST00000536613 GPR108Q9NPR9 543 aa22.63■■□□□ 1.21
CACNB1-205ENST00000536613 IGF2BP3O00425 579 aaKnown RBP eCLIP22.62■■□□□ 1.21
CACNB1-205ENST00000536613 SURF6O75683 361 aaKnown RBP22.62■■□□□ 1.21
CACNB1-205ENST00000536613 ARID4AP29374 1257 aaPredicted RBP22.62■■□□□ 1.21
CACNB1-205ENST00000536613 TCP10Q12799 353 aa22.62■■□□□ 1.21
CACNB1-205ENST00000536613 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
CACNB1-205ENST00000536613 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
CACNB1-205ENST00000536613 SLF2Q8IX21 1173 aa22.62■■□□□ 1.21
CACNB1-205ENST00000536613 WRNIP1Q96S55 665 aa22.62■■□□□ 1.21
CACNB1-205ENST00000536613 FAM198AQ9UFP1 575 aa22.62■■□□□ 1.21
CACNB1-205ENST00000536613 NOP58Q9Y2X3 529 aaKnown RBP22.62■■□□□ 1.21
CACNB1-205ENST00000536613 CCDC85CA6NKD9 419 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 MS4A1P11836 297 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 TNNI3KQ59H18 835 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 PI16Q6UXB8 463 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 FAM163AQ96GL9 167 aaPredicted RBP22.61■■□□□ 1.21
CACNB1-205ENST00000536613 R3HDMLQ9H3Y0 253 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 FPGT-TNNI3KV9GXZ4 949 aa22.61■■□□□ 1.21
CACNB1-205ENST00000536613 TESPA1A2RU30 521 aaPredicted RBP22.6■■□□□ 1.21
CACNB1-205ENST00000536613 UQCRFS1P1P0C7P4 283 aa22.6■■□□□ 1.21
CACNB1-205ENST00000536613 MECOMQ03112 1051 aa22.6■■□□□ 1.21
CACNB1-205ENST00000536613 CEP85Q6P2H3 762 aa22.6■■□□□ 1.21
CACNB1-205ENST00000536613 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
CACNB1-205ENST00000536613 LAMB1P07942 1786 aa22.6■■□□□ 1.21
CACNB1-205ENST00000536613 SPDYE5A6NIY4 337 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 MCAMP43121 646 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 OTUD7BQ6GQQ9 843 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 MIGA2Q7L4E1 593 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 MS4A4AQ96JQ5 239 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 PTPN18Q99952 460 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 IDI2Q9BXS1 227 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 SNCAIPQ9Y6H5 919 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 RFX7Q2KHR2 1363 aa22.59■■□□□ 1.21
CACNB1-205ENST00000536613 MROH7-TTC4A0A0A0MT08 1334 aa22.58■■□□□ 1.21
CACNB1-205ENST00000536613 TBC1D9Q6ZT07 1266 aa22.58■■□□□ 1.21
CACNB1-205ENST00000536613 ZNF384Q8TF68 577 aa22.58■■□□□ 1.21
CACNB1-205ENST00000536613 ZKSCAN4Q969J2 545 aaPredicted RBP22.58■■□□□ 1.21
CACNB1-205ENST00000536613 OTUD5Q96G74 571 aa22.58■■□□□ 1.21
CACNB1-205ENST00000536613 DBNDD2Q9BQY9 259 aa22.58■■□□□ 1.21
CACNB1-205ENST00000536613 FKTNO75072 461 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 BTDP43251 543 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 RGS3P49796 1198 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 GTF2A2P52657 109 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 ERO1BQ86YB8 467 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 ZFPM1Q8IX07 1006 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 RCAN3Q9UKA8 241 aa22.57■■□□□ 1.2
CACNB1-205ENST00000536613 GPR75-ASB3A0A0A6YYF3 556 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 ENTPD3O75355 529 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 GSTO1P78417 241 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 TTC39AQ5SRH9 613 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 BRI3BPQ8WY22 251 aa22.56■■□□□ 1.2
CACNB1-205ENST00000536613 NSUN4Q96CB9 384 aaKnown RBP22.56■■□□□ 1.2
CACNB1-205ENST00000536613 CCL15-CCL14A0A0B4J2E2 113 aa22.55■■□□□ 1.2
CACNB1-205ENST00000536613 WDHD1O75717 1129 aaPredicted RBP22.55■■□□□ 1.2
CACNB1-205ENST00000536613 INPP5BP32019 993 aa22.55■■□□□ 1.2
CACNB1-205ENST00000536613 CCL15Q16663 113 aa22.55■■□□□ 1.2
CACNB1-205ENST00000536613 RAI14Q9P0K7 980 aa22.55■■□□□ 1.2
CACNB1-205ENST00000536613 ZNF112Q9UJU3 913 aa22.55■■□□□ 1.2
CACNB1-205ENST00000536613 ATRNL1Q5VV63 1379 aa22.54■■□□□ 1.2
CACNB1-205ENST00000536613 CRHR2Q13324 411 aa22.54■■□□□ 1.2
CACNB1-205ENST00000536613 PKN2Q16513 984 aaKnown RBP22.54■■□□□ 1.2
CACNB1-205ENST00000536613 ZNF512BQ96KM6 892 aaPredicted RBP22.54■■□□□ 1.2
CACNB1-205ENST00000536613 SNRKQ9NRH2 765 aa22.54■■□□□ 1.2
CACNB1-205ENST00000536613 LRP2BPQ9P2M1 347 aa22.54■■□□□ 1.2
CACNB1-205ENST00000536613 DBNLQ9UJU6 430 aaKnown RBP22.54■■□□□ 1.2
CACNB1-205ENST00000536613 MYH2Q9UKX2 1941 aa22.54■■□□□ 1.2
CACNB1-205ENST00000536613 LDHCP07864 332 aa22.53■■□□□ 1.2
CACNB1-205ENST00000536613 RHBDL3P58872 404 aa22.53■■□□□ 1.2
CACNB1-205ENST00000536613 PPIL2Q13356 520 aa22.53■■□□□ 1.2
CACNB1-205ENST00000536613 DDX4Q9NQI0 724 aaKnown RBP22.53■■□□□ 1.2
CACNB1-205ENST00000536613 DDX19BQ9UMR2 479 aa22.53■■□□□ 1.2
CACNB1-205ENST00000536613 IRF6O14896 467 aa22.52■■□□□ 1.2
CACNB1-205ENST00000536613 PICALMQ13492 652 aa22.52■■□□□ 1.2
CACNB1-205ENST00000536613 SH3BP5LQ7L8J4 393 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms