RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 SCAF8Q9UPN6 1271 aaKnown RBP17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 PCDHAC2Q9Y5I4 1007 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 CSADQ9Y600 493 aa17.42■□□□□ 0.38
SCNN1A-209ENST00000536411 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
SCNN1A-209ENST00000536411 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
SCNN1A-209ENST00000536411 FAM151AQ8WW52 585 aa17.41■□□□□ 0.38
SCNN1A-209ENST00000536411 ENTPD3O75355 529 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 PLCG2P16885 1265 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 PRKG1Q13976 671 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 GRIK5Q16478 980 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 COL13A1Q5TAT6 717 aaPredicted RBP17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 TEPSINQ96N21 525 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 HMG20BQ9P0W2 317 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 LRP2BPQ9P2M1 347 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 MROH7-TTC4A0A0A0MT08 1334 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
SCNN1A-209ENST00000536411 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 TM4SF4P48230 202 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 SPRYD7Q5W111 196 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 IDI2Q9BXS1 227 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 TMEM39BQ9GZU3 492 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 USP40Q9NVE5 1235 aa17.39■□□□□ 0.37
SCNN1A-209ENST00000536411 WDHD1O75717 1129 aaPredicted RBP17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 BAG3O95817 575 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 MAP3K9P80192 1104 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 CDC42EP5Q6NZY7 148 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 MOB2Q70IA6 237 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
SCNN1A-209ENST00000536411 USP2O75604 605 aaPredicted RBP17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 MCAMP43121 646 aa17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 WNK4Q96J92 1243 aa17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
SCNN1A-209ENST00000536411 GPR75-ASB3A0A0A6YYF3 556 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 BTDP43251 543 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 MECOMQ03112 1051 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 AACSQ86V21 672 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 RHPN1Q8TCX5 695 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 RNF186Q9NXI6 227 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 MYH2Q9UKX2 1941 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 AOX1Q06278 1338 aa17.36■□□□□ 0.37
SCNN1A-209ENST00000536411 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 DBNLQ9UJU6 430 aaKnown RBP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
SCNN1A-209ENST00000536411 TRPA1O75762 1119 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 LAMB1P07942 1786 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 GTF2A2P52657 109 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 CACNB3P54284 484 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 AAMPQ13685 434 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 WRNIP1Q96S55 665 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 ZIC5Q96T25 663 aa17.34■□□□□ 0.37
SCNN1A-209ENST00000536411 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
SCNN1A-209ENST00000536411 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.36
SCNN1A-209ENST00000536411 OPTNQ96CV9 577 aa17.33■□□□□ 0.36
SCNN1A-209ENST00000536411 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.36
SCNN1A-209ENST00000536411 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 SPDYE5A6NIY4 337 aa17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 RGS3P49796 1198 aa17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 TCP10Q12799 353 aa17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 VGLL4Q14135 290 aa17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
SCNN1A-209ENST00000536411 ATRNL1Q5VV63 1379 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 PPATQ06203 517 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 GPATCH3Q96I76 525 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 CLMNQ96JQ2 1002 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
SCNN1A-209ENST00000536411 TESPA1A2RU30 521 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 CYP2E1P05181 493 aaPredicted RBP17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 CETPP11597 493 aa17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 PPP4CP60510 307 aa17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 NFIAQ12857 509 aa17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 MKRN3Q13064 507 aaKnown RBP17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 PPIL2Q13356 520 aa17.3■□□□□ 0.36
SCNN1A-209ENST00000536411 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms