RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CHRNDQ07001 517 aa13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 STAP2Q9UGK3 403 aa13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
CHRNB1-202ENST00000536404 SMARCA5O60264 1052 aaPredicted RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 TAF5LO75529 589 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 MX1P20591 662 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 IFIT5Q13325 482 aaKnown RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 RGMBQ6NW40 437 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 ATP6V1DQ9Y5K8 247 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 SYCE3A1L190 88 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 FAM155AB1AL88 458 aaPredicted RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 KCNJ4P48050 445 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 SLC4A10Q6U841 1118 aa13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
CHRNB1-202ENST00000536404 GRM8O00222 908 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 GTF2IP78347 998 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 PKP1Q13835 747 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 PRAMEF18Q5VWM3 479 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
CHRNB1-202ENST00000536404 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 IRS2Q9Y4H2 1338 aa13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 ZNF646O15015 1829 aaPredicted RBP13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 TPM3P06753 285 aa13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 ZNF157P51786 506 aaPredicted RBP13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 HMGN5P82970 282 aaKnown RBP13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 NOGQ13253 232 aa13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
CHRNB1-202ENST00000536404 APBB1O00213 710 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 ALDH1L1O75891 902 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 CHMLP26374 656 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 KIF23Q02241 960 aaPredicted RBP13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 WNT10BO00744 389 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 MOB2Q70IA6 237 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 CCDC102AQ96A19 550 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 SUCLG2Q96I99 432 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
CHRNB1-202ENST00000536404 MYO3BQ8WXR4 1341 aa13.71□□□□□ -0.21
CHRNB1-202ENST00000536404 TRIM6-TRIM34B2RNG4 842 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 CA12O43570 354 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 SASH1O94885 1247 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 DNTTIP2Q5QJE6 756 aaKnown RBP13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 LDHAL6AQ6ZMR3 332 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 KAZALD1Q96I82 304 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 DNAJC2Q99543 621 aaKnown RBP13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.71□□□□□ -0.22
CHRNB1-202ENST00000536404 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 SLC10A3P09131 477 aa13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 PUS3Q9BZE2 481 aaKnown RBP13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
CHRNB1-202ENST00000536404 UBE2Q2LH0YL09 131 aa13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 HSPA4P34932 840 aa13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 RILPL2Q969X0 211 aa13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
CHRNB1-202ENST00000536404 A0A1B0GUL6 1792 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 IL1R1P14778 569 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 PCDHAC2Q9Y5I4 1007 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 UBE2HP62256 183 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 FKBP1BP68106 108 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 IRX3P78415 501 aaPredicted RBP13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
CHRNB1-202ENST00000536404 UTYO14607 1347 aa13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 CCDC66A2RUB6 948 aa13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 F8W031 263 aaPredicted RBP13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 MMP14P50281 582 aa13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 BICC1Q9H694 974 aaKnown RBP13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
CHRNB1-202ENST00000536404 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms