RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ZNF124Q15973 351 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 CEP135Q66GS9 1140 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 NLRP13Q86W25 1043 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 ADAMTS19Q8TE59 1207 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 KLHDC7BQ96G42 594 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
YBX3-205ENST00000536107 SEC31BQ9NQW1 1179 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 PRXQ9BXM0 1461 aa6.53□□□□□ -1.36
YBX3-205ENST00000536107 SAMD9LQ8IVG5 1584 aa6.52□□□□□ -1.36
YBX3-205ENST00000536107 MAP3K1Q13233 1512 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 CDC25BP30305 580 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 ATP11AP98196 1134 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 FBXL6Q8N531 539 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
YBX3-205ENST00000536107 FOXO3O43524 673 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
YBX3-205ENST00000536107 EPHA1P21709 976 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 HYAL2Q12891 473 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 BRINP3Q76B58 766 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 TREML1Q86YW5 311 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 SPACA7Q96KW9 195 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 PAK6Q9NQU5 681 aaPredicted RBP6.51□□□□□ -1.37
YBX3-205ENST00000536107 EP400Q96L91 3159 aa6.51□□□□□ -1.37
YBX3-205ENST00000536107 PRDM15P57071 1507 aaPredicted RBP6.5□□□□□ -1.37
YBX3-205ENST00000536107 NHSL1Q5SYE7 1610 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 XIRP1Q702N8 1843 aaKnown RBP6.5□□□□□ -1.37
YBX3-205ENST00000536107 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
YBX3-205ENST00000536107 ADAMTSL4Q6UY14 1074 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 FLCNQ8NFG4 579 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 WNT8BQ93098 351 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 RUSC1Q9BVN2 902 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 LRFN2Q9ULH4 789 aa6.5□□□□□ -1.37
YBX3-205ENST00000536107 SHPRHQ149N8 1683 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 PLXNC1O60486 1568 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 CYP26A1O43174 497 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 LGR5O75473 907 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 FARP2O94887 1054 aaPredicted RBP6.49□□□□□ -1.37
YBX3-205ENST00000536107 SGO2Q562F6 1265 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 C19orf44Q9H6X5 657 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
YBX3-205ENST00000536107 CFDP1Q9UEE9 299 aaPredicted RBP6.49□□□□□ -1.37
YBX3-205ENST00000536107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
YBX3-205ENST00000536107 ZC3H13Q5T200 1668 aaKnown RBP6.49□□□□□ -1.37
YBX3-205ENST00000536107 NCOA2Q15596 1464 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 DHX29Q7Z478 1369 aaKnown RBP6.48□□□□□ -1.37
YBX3-205ENST00000536107 BIN1O00499 593 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 FNBP4Q8N3X1 1017 aaPredicted RBP6.48□□□□□ -1.37
YBX3-205ENST00000536107 VTI1AQ96AJ9 217 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 ADAM19Q9H013 955 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 RASSF4Q9H2L5 321 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
YBX3-205ENST00000536107 ABCC3O15438 1527 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 SYCP2Q9BX26 1530 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
YBX3-205ENST00000536107 AHDC1Q5TGY3 1603 aaPredicted RBP6.47□□□□□ -1.37
YBX3-205ENST00000536107 FAM177BA6PVY3 158 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 POM121CA8CG34 1229 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 H3BRJ5 948 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 KIF4AO95239 1232 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 PTPRAP18433 802 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 WEE1P30291 646 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 TRIP4Q15650 581 aaPredicted RBP6.47□□□□□ -1.37
YBX3-205ENST00000536107 PKN1Q16512 942 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 LARP1Q6PKG0 1096 aaKnown RBP6.47□□□□□ -1.37
YBX3-205ENST00000536107 SHISA5Q8N114 240 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 DDX17Q92841 729 aaKnown RBP6.47□□□□□ -1.37
YBX3-205ENST00000536107 PBX4Q9BYU1 374 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.37
YBX3-205ENST00000536107 ATRNO75882 1429 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
YBX3-205ENST00000536107 BCL9LQ86UU0 1499 aa6.47□□□□□ -1.37
YBX3-205ENST00000536107 PNPLA6Q8IY17 1366 aa6.46□□□□□ -1.37
YBX3-205ENST00000536107 TMEM2Q9UHN6 1383 aa6.46□□□□□ -1.37
YBX3-205ENST00000536107 CEP350Q5VT06 3117 aa6.46□□□□□ -1.37
YBX3-205ENST00000536107 FAM95CA0A1B0GW59 222 aa6.46□□□□□ -1.38
YBX3-205ENST00000536107 PPP1R15AO75807 674 aaPredicted RBP6.46□□□□□ -1.38
YBX3-205ENST00000536107 DPYDQ12882 1025 aa6.46□□□□□ -1.38
YBX3-205ENST00000536107 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
YBX3-205ENST00000536107 SETD5Q9C0A6 1442 aa6.46□□□□□ -1.38
YBX3-205ENST00000536107 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
YBX3-205ENST00000536107 PTK7Q13308 1070 aa6.45□□□□□ -1.38
YBX3-205ENST00000536107 SPON1Q9HCB6 807 aa6.45□□□□□ -1.38
YBX3-205ENST00000536107 ARHGAP23Q9P227 1491 aa6.45□□□□□ -1.38
YBX3-205ENST00000536107 CDC42BPBQ9Y5S2 1711 aa6.45□□□□□ -1.38
YBX3-205ENST00000536107 KIAA1107Q9UPP5 1409 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 SCNN1AP37088 669 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 CABP4P57796 275 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 NLRP12P59046 1061 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 NFKBIBQ15653 356 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 CRTC2Q53ET0 693 aaPredicted RBP6.44□□□□□ -1.38
YBX3-205ENST00000536107 KRT27Q7Z3Y8 459 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 ZAR1Q86SH2 424 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 POP1Q99575 1024 aaKnown RBP6.44□□□□□ -1.38
YBX3-205ENST00000536107 SUGCTQ9HAC7 445 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 CCDC9Q9Y3X0 531 aaKnown RBP6.44□□□□□ -1.38
YBX3-205ENST00000536107 PLEKHH2Q8IVE3 1493 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms