RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
CHD4-204ENST00000535810 MAST3O60307 1309 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 SEMA3EO15041 775 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 KIF23Q02241 960 aaPredicted RBP10.95□□□□□ -0.66
CHD4-204ENST00000535810 TNFAIP1Q13829 316 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 PRKG1Q13976 671 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 CCDC102BQ68D86 513 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
CHD4-204ENST00000535810 GCC1Q96CN9 775 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 ZDHHC15Q96MV8 337 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 FZD1Q9UP38 647 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 AKAP2Q9Y2D5 859 aa10.95□□□□□ -0.66
CHD4-204ENST00000535810 SALL1Q9NSC2 1324 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 ZBTB7BO15156 539 aaPredicted RBP10.94□□□□□ -0.66
CHD4-204ENST00000535810 PRDX5P30044 214 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 SOX10P56693 466 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 TIMM10P62072 90 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 RASGRF1Q13972 1273 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 LDLRAD1Q5T700 205 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
CHD4-204ENST00000535810 APOBEC3HQ6NTF7 200 aaKnown RBP10.94□□□□□ -0.66
CHD4-204ENST00000535810 ARMC9Q7Z3E5 817 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 PANK1Q8TE04 598 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
CHD4-204ENST00000535810 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
CHD4-204ENST00000535810 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
CHD4-204ENST00000535810 TCP10L2B9ZVM9 353 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
CHD4-204ENST00000535810 PSEN1P49768 467 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 CACNB3P54284 484 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 MVPQ14764 893 aaKnown RBP10.93□□□□□ -0.66
CHD4-204ENST00000535810 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 SUPT20HL1Q3ZLR7 823 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 HHIPL2Q6UWX4 724 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 TEPSINQ96N21 525 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 TMEM39BQ9GZU3 492 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
CHD4-204ENST00000535810 PPP1R12BO60237 982 aaPredicted RBP10.92□□□□□ -0.66
CHD4-204ENST00000535810 G3BP1Q13283 466 aaKnown RBP eCLIP10.92□□□□□ -0.664e-10■■□□□ 13.5
CHD4-204ENST00000535810 RNF186Q9NXI6 227 aa10.92□□□□□ -0.66
CHD4-204ENST00000535810 DAGLAQ9Y4D2 1042 aa10.92□□□□□ -0.66
CHD4-204ENST00000535810 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
CHD4-204ENST00000535810 TNNI2P48788 182 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
CHD4-204ENST00000535810 FKBP1CQ5VVH2 108 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 CEP85Q6P2H3 762 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
CHD4-204ENST00000535810 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 NEUROD6Q96NK8 337 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 TMOD2Q9NZR1 351 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
CHD4-204ENST00000535810 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 UNCXA6NJT0 531 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 USP2O75604 605 aaPredicted RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 TRPA1O75762 1119 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 MS4A1P11836 297 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 IREB2P48200 963 aaKnown RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 OS9Q13438 667 aaPredicted RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
CHD4-204ENST00000535810 NOP58Q9Y2X3 529 aaKnown RBP10.9□□□□□ -0.66
CHD4-204ENST00000535810 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.67
CHD4-204ENST00000535810 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.67
CHD4-204ENST00000535810 GAKO14976 1311 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 CASP8AP2Q9UKL3 1982 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 ZBTB48P10074 688 aaPredicted RBP10.89□□□□□ -0.67
CHD4-204ENST00000535810 NFIAQ12857 509 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 GORABQ5T7V8 394 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 DZIP1Q86YF9 867 aaKnown RBP10.89□□□□□ -0.67
CHD4-204ENST00000535810 ANKRD13AQ8IZ07 590 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 SPATA5Q8NB90 893 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 SLC10A4Q96EP9 437 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 HMG20BQ9P0W2 317 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 ABCF2Q9UG63 623 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 FPGT-TNNI3KV9GXZ4 949 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
CHD4-204ENST00000535810 CENPBP07199 599 aaPredicted RBP10.88□□□□□ -0.67
CHD4-204ENST00000535810 MCAMP43121 646 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 TM4SF4P48230 202 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 SREBF2Q12772 1141 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 VGLL4Q14135 290 aa10.88□□□□□ -0.67
CHD4-204ENST00000535810 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
CHD4-204ENST00000535810 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.88□□□□□ -0.67
CHD4-204ENST00000535810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHD4-204ENST00000535810 ZNF384Q8TF68 577 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms